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Report for CCDS41831.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
41831.1 |
Public |
Homo sapiens |
12 |
IFT81 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:28981](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:41831.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:28981](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 12 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 41831.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000242591.10 |
ENSP00000242591.5 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000242591.10](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000242591.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000242591](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000242591](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000552912.5 |
ENSP00000449718.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000552912.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000449718.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000552912](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000449718](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001143779.2 |
NP_001137251.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001143779.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001137251.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001143779](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001137251](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001137251.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_014055.4 |
NP_054774.2 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_014055.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_054774.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_014055](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_054774](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_054774.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 41831.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2031 nt): ATGAGTGATCAAATTAAATTCATTATGGACAGTCTCAATAAGGAGCCCTTTAGGAAGAACTATAATTTAA TCACGTTTGATTCCTTGGAGCCAATGCAACTATTACAAGTTCTCAGTGATGTTCTGGCTGAGATTGACCC AAAGCAACTTGTGGATATCAGAGAGGAGATGCCAGAGCAGACAGCCAAACGAATGTTGAGCCTTCTTGGT ATTCTTAAGTACAAACCTTCAGGAAATGCCACAGATATGAGTACTTTTCGTCAGGGTTTGGTGATTGGAA GTAAACCTGTAATTTACCCAGTGCTCCACTGGCTTCTTCAGAGGACTAATGAACTGAAGAAAAGAGCATA TTTAGCTCGTTTTTTAATAAAACTTGAGGTACCAAGTGAGTTTCTTCAGGATGAAACTGTGGCTGACACC AATAAACAGTATGAAGAGTTAATGGAAGCCTTTAAAACTTTGCATAAAGAATATGAGCAGCTCAAGATAT CTGGATTTTCTACAGCAGAAATAAGAAAGGATATCAGTGCAATGGAAGAAGAAAAGGATCAGCTCATTAA GAGAGTTGAACATTTGAAGAAAAGGGTTGAGACAGCTCAGAATCATCAATGGATGCTTAAAATAGCAAGG CAACTTCGAGTTGAAAAAGAGAGAGAAGAATATCTTGCACAACAGAAACAGGAACAAAAGAATCAGCTAT TTCATGCAGTGCAAAGATTGCAAAGAGTACAAAACCAGCTGAAAAGCATGCGCCAAGCTGCAGCAGATGC AAAGCCTGAAAGTTTAATGAAGAGGCTAGAGGAGGAGATAAAATTTAATTTATATATGGTAACTGAAAAA TTTCCTAAAGAATTAGAAAATAAGAAAAAGGAATTACATTTTTTACAAAAAGTAGTTTCAGAGCCAGCTA TGGGCCATTCTGATCTTCTTGAACTTGAATCTAAAATAAATGAAATAAACACAGAAATTAACCAGTTGAT TGAAAAGAAAATGATGAGAAATGAGCCCATTGAAGGCAAACTCTCACTGTATAGGCAACAGGCATCTATC ATTTCCCGTAAAAAAGAAGCCAAAGCTGAGGAACTTCAGGAGGCCAAGGAGAAGTTAGCCAGCCTAGAGA GAGAAGCATCAGTAAAGAGAAATCAGACCCGTGAATTTGATGGTACTGAAGTTTTAAAGGGAGATGAGTT CAAACGATATGTCAATAAACTTCGAAGCAAGAGTACAGTTTTCAAAAAGAAGCATCAGATAATAGCTGAA CTTAAAGCTGAATTCGGTCTTTTGCAGAGGACTGAAGAACTTCTTAAGCAACGTCATGAAAATATTCAAC AACAACTGCAAACTATGGAGGAGAAAAAGGGTATATCTGGATATAGTTACACCCAAGAAGAGCTAGAAAG AGTATCTGCACTGAAGAGTGAAGTTGATGAAATGAAAGGACGAACATTGGATGATATGTCTGAAATGGTG AAAAAACTGTATTCATTGGTATCTGAAAAGAAGTCAGCTCTTGCCTCAGTTATAAAAGAGCTACGACAGT TGCGTCAAAAATATCAAGAACTGACCCAGGAGTGTGATGAAAAGAAATCCCAGTATGATAGCTGTGCAGC AGGCCTCGAAAGCAATCGGTCCAAATTAGAACAGGAAGTTAGAAGACTCCGTGAAGAATGTCTTCAAGAA GAAAGTAGATACCATTATACAAATTGTATGATTAAGAACCTAGAAGTTCAACTTCGTCGTGCTACTGATG AGATGAAGGCATATATCTCTTCTGATCAACAAGAAAAAAGAAAGGCAATTAGGGAACAGTATACCAAAAA TACTGCTGAACAAGAAAACCTTGGAAAGAAACTTCGGGAAAAACAAAAAGTTATACGAGAAAGTCATGGT CCAAATATGAAACAAGCAAAAATGTGGCGTGATTTGGAACAATTAATGGAATGTAAGAAACAGTGCTTTC TGAAACAACAAAGCCAAACTTCCATTGGTCAGGTAATTCAGGAGGGTGGGGAGGACCGGCTAATACTGTG A
Translation (676 aa): MSDQIKFIMDSLNKEPFRKNYNLITFDSLEPMQLLQVLSDVLAEIDPKQLVDIREEMPEQTAKRMLSLLG ILKYKPSGNATDMSTFRQGLVIGSKPVIYPVLHWLLQRTNELKKRAYLARFLIKLEVPSEFLQDETVADT NKQYEELMEAFKTLHKEYEQLKISGFSTAEIRKDISAMEEEKDQLIKRVEHLKKRVETAQNHQWMLKIAR QLRVEKEREEYLAQQKQEQKNQLFHAVQRLQRVQNQLKSMRQAAADAKPESLMKRLEEEIKFNLYMVTEK FPKELENKKKELHFLQKVVSEPAMGHSDLLELESKINEINTEINQLIEKKMMRNEPIEGKLSLYRQQASI ISRKKEAKAEELQEAKEKLASLEREASVKRNQTREFDGTEVLKGDEFKRYVNKLRSKSTVFKKKHQIIAE LKAEFGLLQRTEELLKQRHENIQQQLQTMEEKKGISGYSYTQEELERVSALKSEVDEMKGRTLDDMSEMV KKLYSLVSEKKSALASVIKELRQLRQKYQELTQECDEKKSQYDSCAAGLESNRSKLEQEVRRLREECLQE ESRYHYTNCMIKNLEVQLRRATDEMKAYISSDQQEKRKAIREQYTKNTAEQENLGKKLREKQKVIRESHG PNMKQAKMWRDLEQLMECKKQCFLKQQSQTSIGQVIQEGGEDRLIL
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