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Report for CCDS2801.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2801.1 Public Homo sapiens 3 APEH 24 110 108 CCDS HistoryNCBI Gene:327Re-query CCDS DB by CCDS ID:2801.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2801.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296456.10 ENSP00000296456.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000296456.10Link to Ensembl Protein Viewer:ENSP00000296456.5Re-query CCDS DB by Nucleotide ID:ENST00000296456Re-query CCDS DB by Protein ID:ENSP00000296456
Original member Current member NCBI NM_001640.4 NP_001631.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001640.4Link to Protein Sequence:NP_001631.3Re-query CCDS DB by Nucleotide ID:NM_001640Re-query CCDS DB by Protein ID:NP_001631Link to BLAST:NP_001631.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001631.3 732 P13798 732 100% 0 0

Chromosomal Locations for CCDS 2801.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 49674402 49674413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49674489 49674621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49675183 49675309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49675694 49675787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49675891 49675966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49676056 49676219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49676378 49676515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49676609 49676700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49676777 49676817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49676903 49677024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49677573 49677633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49678852 49678949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49679593 49679644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49680541 49680629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49681101 49681239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49681722 49681805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49681887 49681967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49682348 49682436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49682546 49682736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49682843 49682945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49683040 49683146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49683237 49683342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2199 nt):
ATGGAACGTCAGGTGCTGCTGAGCGAGCCCGAGGAGGCGGCGGCTCTGTATCGGGGCCTTAGCCGCCAGC
CCGCGCTGAGCGCCGCCTGCCTGGGCCCGGAGGTCACCACGCAGTACGGCGGCCAATACCGGACGGTGCA
CACTGAGTGGACCCAGAGGGACCTGGAACGCATGGAGAACATTCGATTCTGCCGCCAATACCTGGTGTTC
CATGACGGGGACTCAGTGGTGTTTGCAGGACCTGCAGGCAACAGTGTGGAGACCCGGGGGGAACTGCTGA
GCAGAGAGTCTCCTTCAGGCACCATGAAAGCTGTGCTGCGCAAGGCTGGAGGCACGGGCCCTGGGGAAGA
GAAGCAGTTCCTGGAGGTCTGGGAGAAGAACCGGAAGCTCAAGAGCTTCAACCTGTCAGCGCTGGAGAAA
CATGGGCCTGTTTATGAGGATGACTGCTTTGGCTGCCTGTCCTGGTCGCACTCGGAGACACACTTGTTGT
ATGTGGCAGAGAAGAAGCGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTTGGACGTCAGTGCCAG
CGATGATGAGATAGCCAGGCTGAAGAAGCCAGACCAAGCCATCAAGGGGGATCAGTTTGTGTTTTATGAA
GACTGGGGAGAAAACATGGTTTCCAAAAGCATCCCTGTGCTCTGCGTGCTGGATGTCGAGAGTGGCAACA
TCTCTGTGCTTGAGGGGGTCCCTGAGAATGTGTCCCCTGGACAGGCATTTTGGGCCCCTGGAGATGCTGG
TGTGGTGTTTGTGGGCTGGTGGCATGAGCCCTTCCGGTTGGGCATCCGCTTTTGCACCAATCGCAGGTCA
GCCCTGTATTATGTGGACCTCATCGGGGGGAAGTGTGAGCTCCTCTCGGATGACTCCCTGGCTGTCTCTT
CTCCCCGGCTGAGCCCAGACCAATGTCGCATTGTCTACCTGCAGTACCCATCTCTGATCCCCCATCACCA
ATGCAGCCAGCTGTGCCTGTATGACTGGTATACCAAGGTTACCTCAGTGGTGGTAGATGTTGTGCCTCGG
CAGCTGGGAGAGAACTTCTCTGGGATCTACTGCAGCCTTCTGCCTTTGGGATGCTGGTCAGCTGACAGCC
AGAGAGTGGTCTTTGACTCGGCTCAGCGCAGCCGGCAGGACCTGTTTGCTGTGGACACCCAAGTGGGCAC
TGTGACCTCCCTCACAGCTGGAGGGTCAGGTGGGAGCTGGAAGTTGCTCACAATTGACCAGGACCTCATG
GTGGCACAGTTTTCCACACCCAGCCTACCTCCAACCCTGAAAGTTGGGTTCCTGCCTTCTGCAGGGAAGG
AGCAGTCAGTGTTGTGGGTGTCCCTGGAGGAGGCCGAGCCCATTCCCGACATCCACTGGGGCATCCGGGT
GCTACAGCCACCCCCAGAGCAAGAGAATGTGCAGTATGCTGGCCTTGACTTTGAAGCAATCCTGCTGCAG
CCTGGCAGCCCTCCAGATAAGACCCAAGTGCCCATGGTGGTCATGCCCCACGGGGGGCCCCATTCATCCT
TTGTCACTGCCTGGATGCTGTTCCCAGCCATGCTTTGCAAGATGGGCTTTGCGGTACTACTAGTGAACTA
TCGTGGCTCCACGGGCTTTGGCCAGGACAGCATCCTCTCCCTCCCAGGCAATGTGGGCCACCAGGATGTG
AAGGATGTCCAGTTTGCAGTGGAACAGGTGCTCCAGGAGGAACACTTTGATGCAAGCCATGTGGCCCTTA
TGGGTGGTTCCCATGGTGGCTTCATTTCCTGCCACTTGATTGGTCAGTACCCAGAGACCTACAGGGCCTG
CGTGGCCCGGAACCCCGTGATCAACATCGCCTCCATGTTGGGCTCCACTGACATCCCTGACTGGTGCGTG
GTGGAGGCTGGCTTTCCTTTCAGCAGTGACTGCCTGCCAGACCTCAGCGTGTGGGCTGAGATGCTGGACA
AATCGCCCATCAGATACATCCCTCAGGTGAAGACACCACTGTTACTGATGTTGGGCCAGGAGGACCGGCG
TGTGCCCTTCAAGCAGGGCATGGAGTATTACCGTGCCCTCAAGACCCGGAATGTGCCTGTTCGGCTCCTG
CTCTATCCCAAAAGCACCCACGCATTATCAGAGGTGGAGGTGGAGTCAGACAGCTTCATGAATGCTGTGC
TCTGGCTACGCACACACTTGGGCAGCTGA

Translation (732 aa):
MERQVLLSEPEEAAALYRGLSRQPALSAACLGPEVTTQYGGQYRTVHTEWTQRDLERMENIRFCRQYLVF
HDGDSVVFAGPAGNSVETRGELLSRESPSGTMKAVLRKAGGTGPGEEKQFLEVWEKNRKLKSFNLSALEK
HGPVYEDDCFGCLSWSHSETHLLYVAEKKRPKAESFFQTKALDVSASDDEIARLKKPDQAIKGDQFVFYE
DWGENMVSKSIPVLCVLDVESGNISVLEGVPENVSPGQAFWAPGDAGVVFVGWWHEPFRLGIRFCTNRRS
ALYYVDLIGGKCELLSDDSLAVSSPRLSPDQCRIVYLQYPSLIPHHQCSQLCLYDWYTKVTSVVVDVVPR
QLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFAVDTQVGTVTSLTAGGSGGSWKLLTIDQDLM
VAQFSTPSLPPTLKVGFLPSAGKEQSVLWVSLEEAEPIPDIHWGIRVLQPPPEQENVQYAGLDFEAILLQ
PGSPPDKTQVPMVVMPHGGPHSSFVTAWMLFPAMLCKMGFAVLLVNYRGSTGFGQDSILSLPGNVGHQDV
KDVQFAVEQVLQEEHFDASHVALMGGSHGGFISCHLIGQYPETYRACVARNPVINIASMLGSTDIPDWCV
VEAGFPFSSDCLPDLSVWAEMLDKSPIRYIPQVKTPLLLMLGQEDRRVPFKQGMEYYRALKTRNVPVRLL
LYPKSTHALSEVEVESDSFMNAVLWLRTHLGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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