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Report for CCDS594.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
594.1 Public Homo sapiens 1 FAM151A 24 110 108 CCDS HistoryNCBI Gene:338094Re-query CCDS DB by CCDS ID:594.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 594.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302250.7 ENSP00000306888.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302250.7Link to Ensembl Protein Viewer:ENSP00000306888.2Re-query CCDS DB by Nucleotide ID:ENST00000302250Re-query CCDS DB by Protein ID:ENSP00000306888
Original member Current member NCBI NM_176782.3 NP_788954.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_176782.3Link to Protein Sequence:NP_788954.2Re-query CCDS DB by Nucleotide ID:NM_176782Re-query CCDS DB by Protein ID:NP_788954Link to BLAST:NP_788954.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_788954.2 585 Q8WW52-1 585 100% 0 0

Chromosomal Locations for CCDS 594.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 54609268 54609941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54610412 54610555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54611606 54611745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54612486 54612710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54614700 54614859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54616020 54616172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54619864 54620007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54623278 54623395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1758 nt):
ATGGTCTGCAGGGAGCAGTTATCAAAGAATCAGGTCAAGTGGGTGTTTGCCGGCATTACCTGTGTGTCTG
TGGTGGTCATTGCCGCAATAGTCCTTGCCATCACCCTGCGGCGGCCAGGCTGTGAGCTGGAGGCCTGCAG
CCCTGATGCCGACATGCTGGACTACCTGCTGAGCCTGGGCCAGATCAGCCGGCGAGATGCCTTGGAGGTC
ACCTGGTACCACGCAGCCAACAGCAAGAAAGCCATGACAGCTGCCCTGAACAGCAACATCACAGTCCTGG
AGGCTGACGTCAATGTAGAAGGGCTCGGCACAGCCAATGAGACAGGAGTTCCCATCATGGCACACCCCCC
CACTATCTACAGTGACAACACACTGGAGCAGTGGCTGGACGCTGTGCTGGGCTCTTCCCAAAAGGGCATC
AAACTGGACTTCAAGAACATCAAGGCAGTGGGCCCCTCCCTGGACCTCCTGCGGCAGCTGACAGAGGAAG
GCAAAGTCCGGCGGCCCATATGGATCAACGCTGACATCTTAAAGGGCCCCAACATGCTCATCTCAACTGA
GGTCAATGCCACACAGTTCCTGGCCCTGGTCCAGGAGAAGTATCCCAAGGCTACCCTATCTCCAGGCTGG
ACCACCTTCTACATGTCCACGTCCCCAAACAGGACGTACACCCAAGCCATGGTGGAGAAGATGCACGAGC
TGGTGGGAGGAGTGCCCCAGAGGGTCACCTTCCCTGTACGGTCTTCCATGGTGCGGGCTGCCTGGCCCCA
CTTCAGCTGGCTGCTGAGCCAATCTGAGAGGTACAGCCTGACGCTGTGGCAGGCTGCCTCGGACCCCATG
TCGGTGGAAGATCTGCTCTACGTCCGGGATAACACTGCTGTCCACCAAGTCTACTATGACATCTTTGAGC
CTCTCCTGTCACAGTTCAAGCAGCTGGCCTTGAATGCCACACGGAAACCAATGTACTACACGGGAGGCAG
CCTGATCCCTCTTCTCCAGCTGCCTGGGGATGACGGTCTGAATGTGGAGTGGCTGGTTCCTGACGTCCAG
GGCAGCGGTAAAACAGCAACAATGACCCTCCCAGACACAGAAGGCATGATCCTGCTGAACACTGGCCTCG
AGGGAACTGTGGCTGAAAACCCCGTGCCCATTGTTCATACTCCAAGTGGCAACATCCTGACGCTGGAGTC
CTGCCTGCAGCAGCTGGCCACACATCCCGGACACTGGGGCATCCATTTGCAAATAGCGGAGCCCGCAGCC
CTCCGGCCATCCCTGGCCTTGCTGGCACGCCTCTCCAGCCTTGGCCTCTTGCATTGGCCTGTGTGGGTTG
GGGCCAAAATCTCCCACGGGAGTTTTTCGGTCCCCGGCCATGTGGCTGGCAGAGAGCTGCTTACAGCTGT
GGCTGAGGTCTTCCCCCACGTGACTGTGGCACCAGGCTGGCCTGAGGAGGTGCTGGGCAGTGGCTACAGG
GAACAGCTGCTCACAGATATGCTAGAGTTGTGCCAGGGGCTCTGGCAACCTGTGTCCTTCCAGATGCAGG
CCATGCTGCTGGGCCACAGCACAGCTGGAGCCATAGGCAGGCTGCTGGCATCCTCCCCCCGGGCCACCGT
CACAGTGGAGCACAACCCAGCTGGGGGCGACTATGCCTCTGTGAGGACAGCATTGCTGGCAGCTAGGGCT
GTGGACAGGACCCGAGTCTACTACAGGCTACCCCAGGGCTACCACAAGGACTTGCTGGCTCATGTTGGTA
GAAACTGA

Translation (585 aa):
MVCREQLSKNQVKWVFAGITCVSVVVIAAIVLAITLRRPGCELEACSPDADMLDYLLSLGQISRRDALEV
TWYHAANSKKAMTAALNSNITVLEADVNVEGLGTANETGVPIMAHPPTIYSDNTLEQWLDAVLGSSQKGI
KLDFKNIKAVGPSLDLLRQLTEEGKVRRPIWINADILKGPNMLISTEVNATQFLALVQEKYPKATLSPGW
TTFYMSTSPNRTYTQAMVEKMHELVGGVPQRVTFPVRSSMVRAAWPHFSWLLSQSERYSLTLWQAASDPM
SVEDLLYVRDNTAVHQVYYDIFEPLLSQFKQLALNATRKPMYYTGGSLIPLLQLPGDDGLNVEWLVPDVQ
GSGKTATMTLPDTEGMILLNTGLEGTVAENPVPIVHTPSGNILTLESCLQQLATHPGHWGIHLQIAEPAA
LRPSLALLARLSSLGLLHWPVWVGAKISHGSFSVPGHVAGRELLTAVAEVFPHVTVAPGWPEEVLGSGYR
EQLLTDMLELCQGLWQPVSFQMQAMLLGHSTAGAIGRLLASSPRATVTVEHNPAGGDYASVRTALLAARA
VDRTRVYYRLPQGYHKDLLAHVGRN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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