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Report for CCDS14528.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14528.1 Public Homo sapiens X DNAAF6 24 110 108 CCDS HistoryNCBI Gene:139212Re-query CCDS DB by CCDS ID:14528.1Re-query CCDS DB by GeneID:139212See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14528.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336387.4 ENSP00000337757.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000336387.4Link to Ensembl Protein Viewer:ENSP00000337757.4Re-query CCDS DB by Nucleotide ID:ENST00000336387Re-query CCDS DB by Protein ID:ENSP00000337757
Original member Current member EBI ENST00000372453.8 ENSP00000361531.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372453.8Link to Ensembl Protein Viewer:ENSP00000361531.3Re-query CCDS DB by Nucleotide ID:ENST00000372453Re-query CCDS DB by Protein ID:ENSP00000361531
Original member Current member EBI ENST00000535523.6 ENSP00000441930.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535523.6Link to Ensembl Protein Viewer:ENSP00000441930.1Re-query CCDS DB by Nucleotide ID:ENST00000535523Re-query CCDS DB by Protein ID:ENSP00000441930
Original member Current member NCBI NM_001169154.2 NP_001162625.1 Accepted alive Link to Nucleotide Sequence:NM_001169154.2Link to Protein Sequence:NP_001162625.1Re-query CCDS DB by Nucleotide ID:NM_001169154Re-query CCDS DB by Protein ID:NP_001162625Link to BLAST:NP_001162625.1
Original member Current member NCBI NM_173494.2 NP_775765.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173494.2Link to Protein Sequence:NP_775765.1Re-query CCDS DB by Nucleotide ID:NM_173494Re-query CCDS DB by Protein ID:NP_775765Link to BLAST:NP_775765.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001162625.1 214 Q9NQM4 214 100% 0 0
NP_775765.1 214 Q9NQM4 214 100% 0 0

Chromosomal Locations for CCDS 14528.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 107212876 107213028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 107216671 107216743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 107218864 107218969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 107222745 107222841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 107238922 107239007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 107243169 107243298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (645 nt):
ATGGAATCTGAAAATATGGATTCTGAAAATATGAAGACAGAAAATATGGAATCTCAAAATGTAGACTTTG
AGAGTGTTTCTTCAGTTACAGCTCTGGAAGCCCTCTCTAAGCTACTTAATCCTGAAGAAGAGGATGATTC
TGACTATGGACAGACAAATGGTTTATCTACTATTGGAGCCATGGGTCCTGGGAATATTGGACCACCCCAA
ATAGAAGAGCTCAAAGTCATCCCTGAAACCAGCGAGGAAAATAATGAGGACATCTGGAATTCAGAAGAGA
TTCCAGAAGGAGCAGAATATGATGATATGTGGGATGTTAGAGAAATCCCAGAGTATGAGATTATATTCAG
ACAGCAGGTGGGAACTGAAGATATATTTTTAGGGTTGTCAAAAAAGGACTCCTCAACAGGTTGTTGCAGT
GAACTAGTGGCTAAAATTAAATTGCCAAATACAAACCCTTCTGATATTCAAATTGATATCCAGGAAACAA
TCCTTGACCTTCGTACTCCTCAGAAGAAGCTGTTGATAACTCTTCCTGAGCTGGTGGAATGTACCAGTGC
CAAAGCATTCTATATCCCAGAGACTGAAACTCTTGAAATCACTATGACTATGAAAAGAGAGTTAGATATT
GCTAATTTCTTCTGA

Translation (214 aa):
MESENMDSENMKTENMESQNVDFESVSSVTALEALSKLLNPEEEDDSDYGQTNGLSTIGAMGPGNIGPPQ
IEELKVIPETSEENNEDIWNSEEIPEGAEYDDMWDVREIPEYEIIFRQQVGTEDIFLGLSKKDSSTGCCS
ELVAKIKLPNTNPSDIQIDIQETILDLRTPQKKLLITLPELVECTSAKAFYIPETETLEITMTMKRELDI
ANFF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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