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Report for CCDS11711.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11711.1 Public Homo sapiens 17 MRPL58 24 110 108 CCDS HistoryNCBI Gene:3396Re-query CCDS DB by CCDS ID:11711.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11711.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301585.10 ENSP00000301585.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000301585.10Link to Ensembl Protein Viewer:ENSP00000301585.5Re-query CCDS DB by Nucleotide ID:ENST00000301585Re-query CCDS DB by Protein ID:ENSP00000301585
Original member Current member NCBI NM_001545.3 NP_001536.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001545.3Link to Protein Sequence:NP_001536.1Re-query CCDS DB by Nucleotide ID:NM_001545Re-query CCDS DB by Protein ID:NP_001536Link to BLAST:NP_001536.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001536.1 206 Q14197 206 100% 0 0

Chromosomal Locations for CCDS 11711.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 75012687 75012872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75017078 75017114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75019700 75019759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75020313 75020395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75020488 75020657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75020921 75021005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (621 nt):
ATGGCGGCCACCAGGTGCCTGCGCTGGGGCCTGAGCCGAGCCGGAGTCTGGCTGCTCCCACCGCCCGCAC
GGTGCCCACGCCGGGCGCTGCACAAGCAGAAAGACGGCACTGAGTTCAAGAGCATCTACAGCCTGGACAA
GCTCTACCCCGAATCTCAGGGCTCGGACACCGCCTGGAGGGTCCCGAATGGTGCAAAGCAAGCCGACAGT
GACATCCCTCTAGATCGCTTGACAATATCTTATTGTCGGAGTAGTGGTCCTGGGGGGCAGAATGTGAACA
AAGTGAATTCCAAGGCAGAAGTCAGGTTCCATTTGGCAACTGCCGAGTGGATCGCGGAGCCCGTGCGGCA
GAAGATAGCCATCACGCATAAAAACAAGATCAACAGGTTAGGAGAGTTGATCCTCACCTCTGAGAGCAGC
CGCTATCAGTTCCGGAATCTGGCAGATTGCCTGCAGAAAATTCGAGACATGATCACTGAGGCCAGCCAGA
CACCGAAGGAGCCAACAAAAGAAGATGTTAAACTTCATAGAATCAGGATAGAAAACATGAATCGGGAAAG
GCTGAGACAAAAGAGAATTCATTCTGCTGTAAAGACAAGCAGGAGGGTCGACATGGACTGA

Translation (206 aa):
MAATRCLRWGLSRAGVWLLPPPARCPRRALHKQKDGTEFKSIYSLDKLYPESQGSDTAWRVPNGAKQADS
DIPLDRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESS
RYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRIENMNRERLRQKRIHSAVKTSRRVDMD


Links Key
 Links to:   History report
  BLAST report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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