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Report for CCDS35337.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
35337.1 |
Public |
Homo sapiens |
X |
NEXMIF |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:340533](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:35337.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome X in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 35337.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000055682.12 |
ENSP00000055682.5 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000055682.12](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000055682.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000055682](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000055682](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000616200.2 |
ENSP00000480284.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000616200.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000480284.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000616200](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000480284](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001008537.3 |
NP_001008537.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001008537.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001008537.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001008537](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001008537](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001008537.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001008537.1 |
1516 |
Q5QGS0 |
1516 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 35337.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (4551 nt): ATGGATAACCAACAAGATAAGGCTATTGTTGCCTCAGCCAACGGAGAAAACACTCTGATTAATGGGGTCA AAGAAAATGACTCAGAGGACCAGGATGTGGCAATGAAGTCATTTGCAGCTCTAGAAGCTGCTGCACCTAT CCAGCCTACACCGGTGGCACAAAAAGAGACCCTGATGTATCCCAGAGGTCTCCTGCCTCTACCCTCTAAG AAGCCCTGTATGCAGAGCCCGCCCTCTCCTTTGGGCCTGATTGAAGCACCCGAACATGCTGCTAATAGTG CTTCTGTGAATGCCATCTCCCTCACATCTGGCATTGCAAAAGGCCTGAACACATGGTCACTTCCCAATGA ATGTGAGAAAGCTCCATTTGCCATAATGGAGCCTGCAGGCATGTCAGCTCTGAATGGGGACTGTCTCATG CAGCCAAGTCGGACTTGCTTAGGCTGCTTCATGGAATCCAAGGATGCAGTAGATCCTGAGCCAGGGATCA GTCTGAAAGTTGGTGATCTAAATAGGGATTATGAAACGTGTGCAGTCTCTGATATAGGGATTCAGTGTAT TAATGCTGGAGAAAATATGAAATATGGAGAGCAGCTGCTCTCAGACCAGCTCCTAGGCTTCCCCCTGCAT AAGTCAAGGGCAGGAGACAGACGAGAAACTGAGAAACCTGACATTGACTTGGAGGATCCGGCTCAGAAAA GCTATTATGAGGCATTACTGTTAGACAAGTGCAATACAGAAGAAGCTTTGCTTGCAAATTCCAATCAGGA TTGGGGTTACTTCGAGACTTTTATTAGTGAAAGTAAGATTGAACTGCTTGACCTCTGTTCCAAAAATGAG CTGTCTGTCAACCTATTCTCTGAAGAAGATGTGGATAACTACATGTTTGATGATGATGAATCAACACTAG GCAGTGATGTCTGCTCCCTGAAAATTCGATATGAATCCTTTCAGGACAATGTTCGAGACAAGACTACTCT TTTGATGCAGGAAGATGCCCAATTCAACTTTTTTCCCAGCGTCTTTACTACCTGCCCCAAGCGAGAGTCT AAGAGTGGGGCCCTGAAGCAGAGCAGTGATTTTTCCCAATTCAAGGTCCCTGATGTGAGCATCATCTGGG GGGAGGAAGATAAAAACTTGGACAAGAAGAAAGGCAAAGAGGAAGGACAGGAAGACAAAGGTGTAGAGAA GAAAGATGGAAAGGATAATGGAGAAAAGCCTGCCTTAAATAAACCATGCAGTGGGACTGAAGTAGAGCAA CTTAAGAATCCAAAGCAGGGCCATCTTGCTAATTCCCTGGAGACATCAGGGAGTTTCAGTGATGATAGTT CCTTCATTGAGATCTCATATGATGCTATGGGTGAGATCAAGGACTGTAGTCGCTATATGGCTCGGGACAC TAATTCTGGCAGCTCCTCCTCCCAACAGAACTATGGGCTGCGAGCCAAGAGAAAAGTCAGATACAGTGAA GATTATCTATATGATGTTGACTCACTAGAGGGTGAAAAAGTAAATGAGAGGAAGGAATGGCTGCCAGTTG GTTCCAAAGAGGAAGATGATGATGAATGGTGTCCCAAAAAGAGAAGAAAAGTAACCCGTAAGGAGCCCCC TGTTATTATCAAATATATCATCATTAATCGCTTTAAAGGTGAGAAGAACATGCTGGTGAAGTTGGGTAAG GTGGATGCCAGTGAGACAACAGTGAATTTGAGTGAGAATCAGCTCAACAAATATGCCAAGCTGGCACCCT TGAAAGGCTTCTGGCAAAAGAAGAAGAAGCAGAGAAACACCAACACGGACTCCATCAAGACACCTTTTTC CCAAAAGCAAAGCTTTGAACCAGGTAGCTTTGAGGTGTCATTTCTGCCACCTGCTCGCAAACGAAAATCT AAACTTGGCAACAGGCACAGGATTCAAAGAATCCCATCCATTGAAATTTCAGCAAGTAGTAAACAGATTT CATTATGTAATGATCAGAGGCACGCTAGTAATCATAAAGAAGATGGAGGCCTAAAAGGTACACTGAAGTC AGCACCTCTGGGTGCTCCTAGCTGTGCAAATGGATCACATTTAAATGACATCACAGGCCCTGACTCAGTG AAAGTCAAAGCCCAAGACACAGAGTTTAAGGGGCCAGAGAGGAAAGTGCTCAATAAAATCAAATTTAAAA GTGAAGCTAGGTTAAAATCTAAGAAAGTCAAAGCTGCTGGGCAAGAAAGCAAGCCAATTGTTCAAATGAG CCCTCTCTTGGAAAACCAATCCTCAAAGGCTAATTTAAAGAATGAAGTTATTCCTGGGACATCAAACAGT TCCCGTCTATCTGAATTTCATGAGGCAAAGGCTGCTAAGAGTTCCACTTTTCTACCAACGACATGCTCTT CTGAAATGCCTTTATCATCTGCTAATGTTACCACTAATATACCTGTTATCCCGGGAGGGTATCTGCAGAC ATTGTTAGATGCTTCTGACTTGTCAAATAACACTAGTATCTCATACTTCAGCCACCATTCTCCAGAGCAA AATGAAGGCAGCCTCACTCAAACCGAAAAATCATTTGTACCCCTCCAGCCTACCCAGGACTGTGTGCTCA CCTCATCCTCTGACTCTGAGCTGCAGCAGTCATCTCATAACTTCAAAATGGAATCAAGCAACTATAGAAA TGTGTGGCCCAACAAGGCTACTTCTGGCACCCAGGAATTCATGGCTGAAGTCTCAAGGGAGATAGCCCCA ACCCAATCCAGTGAATTTGGAGCCTCCCAAGTAGTCTCCATGGAAAATAACCTCACACCTACAACATACA ATCCAATCTGTCTCAATAGTGGTGGCAGTAATTGCAACAAGGTCCTGTATGACTCCATGCAAGATACCCA ACTCCCATCTGATGACTCTTACCAATTATGTCACTTTAATAATGGAGAGATCTGCTTTCCTTTCCAGCAG GGGCCAGTCAATATGGATGATGGTCGGCTCTTTAGCTTTGATTCAATGGCCCCACTCTCTGTCAGCTCAA GTAATTATTGCTCCTTAAGCTTGAAGTCCTGTGAAAAGGATGGCGATGATGATATCACTGATGACTTCCT GGCCCATTGCAGCCCTAAGCTGGTGATCCAGCAAAGCATTGATGAGATAGCACCACTAAAGGAGTCCACT GACCTCCTGGATATATCCAACTTCACCCCTGACAAATTCCGCCACTCTTCCCTTTCAGAGATGTCCCCAC CGGACACCCCTAGTCTTTCCCCTCAAATTACCAGATGTGAGAGTATGAAGACACTAGGAACACTAAAGGG GTTCCAAGAGGGTGTCCCAGGACCATTGGACAGTGTGGAAAAAATCAAGTGGGACTGCAGTACCCTTTCA CGGCAGGTCCAAATGGAGGATGGATTTACTTTAAATAATCACCAGTTTCAGTTCCATATGTTCAATGATG AGGATTCTGTCAGCCTGCTCCAAAAAAACCCTTGCCTGTCAACATTTAATGATCCATCTGGTCAAATTAG TACCAACAACAAAGTGTCAAAATCAAGAAAGAAAAGTTCACCCAGCAAGAGTGGGGCTATGAACCAAAGC TCTTCTCAGAAAAACACCAGGAAAAAATCCCTCAAAGGTAACAACAAGGGGATTGAAAAACCACCTGGCA AAAACTCCCGCCAGGTCCCTAAGTCCACAAAGAAAGGGAAATACATGGCTGCCATCAATGGAGAGAAAAT GCAAATTGGCATTGGCCGTGGGGGAAGCCAAACCAACACCATATCCTCCACTGGGAAGACATTGGCTGAA TGTATCCAACATGGTGGCCCTATGGCCTCTATGAAGATGCCAAGTCAAAAGGGACTTTCTGGAGATTGGG CCTTGGGGAAGGAGAGCAGCCCAGGCTGGAGTGATATGAGCATGGGCACCAACACCAACAGCCTTCTGGA TGATGACCAACGGGAATTTCAGGAGCCTTCCTATATCTTGTCCAACATTGCCTCTGGTATGGCAGATGTG CAGAGATTCATGATGGCCTCCATAGAGCCCCTTTGGGAACCCATGGAGCACCATGGGGATCCCAACATAT TCTACTCCCCTGAGTCCAATAGTCTAAAATTAAAAACCCTCAAAATATTGGCTGGGACACCACAGGAGTC TAAGAAAAAGATCAACAGTGGGTCCCAAGGAGCCACTAAGAATCACAGGTCAATCAAGGGTGTGAGCAAA AGCAATGGGAAAACAGCAATAGGTGATCCTGGTCGTGCAAACATGCCTGGTTATAACGAGGACTCTCGCT CTACCTTCTTTGATAAAAAGTATAGTAACATGAGCACTTTAGGCAATAACGGACCGACACACAAAAAGTT GTATCGTCACAAATCCAGCTCCAAGGCCCTGAGAGATGAGAAATGTAAGGGAAAGCACATGGAGCGAGAA CAGGTCCACAAGGATGAGTCTGGGACAGCTTCTTTTGAAAAACTGAGGGATTCCGACTACAATCTCCTAA AAGCAGAAACAACCTTTTGGGTTTTACCTGTGTTTGAAGAAGAGACTCGCATTTTCCAGAAAGACATTTG A
Translation (1516 aa): MDNQQDKAIVASANGENTLINGVKENDSEDQDVAMKSFAALEAAAPIQPTPVAQKETLMYPRGLLPLPSK KPCMQSPPSPLGLIEAPEHAANSASVNAISLTSGIAKGLNTWSLPNECEKAPFAIMEPAGMSALNGDCLM QPSRTCLGCFMESKDAVDPEPGISLKVGDLNRDYETCAVSDIGIQCINAGENMKYGEQLLSDQLLGFPLH KSRAGDRRETEKPDIDLEDPAQKSYYEALLLDKCNTEEALLANSNQDWGYFETFISESKIELLDLCSKNE LSVNLFSEEDVDNYMFDDDESTLGSDVCSLKIRYESFQDNVRDKTTLLMQEDAQFNFFPSVFTTCPKRES KSGALKQSSDFSQFKVPDVSIIWGEEDKNLDKKKGKEEGQEDKGVEKKDGKDNGEKPALNKPCSGTEVEQ LKNPKQGHLANSLETSGSFSDDSSFIEISYDAMGEIKDCSRYMARDTNSGSSSSQQNYGLRAKRKVRYSE DYLYDVDSLEGEKVNERKEWLPVGSKEEDDDEWCPKKRRKVTRKEPPVIIKYIIINRFKGEKNMLVKLGK VDASETTVNLSENQLNKYAKLAPLKGFWQKKKKQRNTNTDSIKTPFSQKQSFEPGSFEVSFLPPARKRKS KLGNRHRIQRIPSIEISASSKQISLCNDQRHASNHKEDGGLKGTLKSAPLGAPSCANGSHLNDITGPDSV KVKAQDTEFKGPERKVLNKIKFKSEARLKSKKVKAAGQESKPIVQMSPLLENQSSKANLKNEVIPGTSNS SRLSEFHEAKAAKSSTFLPTTCSSEMPLSSANVTTNIPVIPGGYLQTLLDASDLSNNTSISYFSHHSPEQ NEGSLTQTEKSFVPLQPTQDCVLTSSSDSELQQSSHNFKMESSNYRNVWPNKATSGTQEFMAEVSREIAP TQSSEFGASQVVSMENNLTPTTYNPICLNSGGSNCNKVLYDSMQDTQLPSDDSYQLCHFNNGEICFPFQQ GPVNMDDGRLFSFDSMAPLSVSSSNYCSLSLKSCEKDGDDDITDDFLAHCSPKLVIQQSIDEIAPLKEST DLLDISNFTPDKFRHSSLSEMSPPDTPSLSPQITRCESMKTLGTLKGFQEGVPGPLDSVEKIKWDCSTLS RQVQMEDGFTLNNHQFQFHMFNDEDSVSLLQKNPCLSTFNDPSGQISTNNKVSKSRKKSSPSKSGAMNQS SSQKNTRKKSLKGNNKGIEKPPGKNSRQVPKSTKKGKYMAAINGEKMQIGIGRGGSQTNTISSTGKTLAE CIQHGGPMASMKMPSQKGLSGDWALGKESSPGWSDMSMGTNTNSLLDDDQREFQEPSYILSNIASGMADV QRFMMASIEPLWEPMEHHGDPNIFYSPESNSLKLKTLKILAGTPQESKKKINSGSQGATKNHRSIKGVSK SNGKTAIGDPGRANMPGYNEDSRSTFFDKKYSNMSTLGNNGPTHKKLYRHKSSSKALRDEKCKGKHMERE QVHKDESGTASFEKLRDSDYNLLKAETTFWVLPVFEEETRIFQKDI
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