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Report for CCDS73251.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73251.1 Public Homo sapiens 11 OVCH2 24 110 108 CCDS HistoryNCBI Gene:341277Re-query CCDS DB by CCDS ID:73251.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 73251.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000533663.6 ENSP00000484497.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000533663.6Link to Ensembl Protein Viewer:ENSP00000484497.2Re-query CCDS DB by Nucleotide ID:ENST00000533663Re-query CCDS DB by Protein ID:ENSP00000484497
Original member Current member EBI ENST00000612000.1 ENSP00000484790.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000612000.1Link to Ensembl Protein Viewer:ENSP00000484790.1Re-query CCDS DB by Nucleotide ID:ENST00000612000Re-query CCDS DB by Protein ID:ENSP00000484790
Original member Current member NCBI NM_198185.7 NP_937828.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198185.7Link to Protein Sequence:NP_937828.3Re-query CCDS DB by Nucleotide ID:NM_198185Re-query CCDS DB by Protein ID:NP_937828Link to BLAST:NP_937828.3

Chromosomal Locations for CCDS 73251.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 7689955 7690013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7691269 7691400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7691902 7691995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7695058 7695188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7695570 7695710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7696465 7696589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7696709 7696799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7698750 7698773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7700296 7700485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7701324 7701475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7701716 7701811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7702157 7702329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7703698 7703789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7704565 7704674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7706307 7706394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1698 nt):
ATGCTTATAAGCAGGAACAAGCTGATTTTACTACTAGGAATAGTCTTTTTTGAACGAGGTAAATCTGCAA
CTCTTTCGCTCCCCAAAGCTCCCAGTTGTGGGCAGAGTCTGGTTAAGGTACAGCCTTGGAATTATTTTAA
CATTTTCAGTCGCATTCTTGGAGGAAGCCAAGTGGAGAAGGGTTCCTATCCCTGGCAGGTATCTCTGAAA
CAAAGGCAGAAGCATATTTGTGGAGGAAGCATCGTCTCACCACAGTGGGTGATCACGGCGGCTCACTGCA
TTGCAAACAGAAACATTGTGTCTACTTTGAATGTTACTGCTGGAGAGTATGACTTAAGCCAGACAGACCC
AGGAGAGCAAACTCTCACTATTGAAACTGTCATCATACATCCACATTTCTCCACCAAGAAACCAATGGAC
TATGATATTGCCCTTTTGAAGATGGCTGGAGCCTTCCAATTTGGCCACTTTGTGGGGCCCATATGTCTTC
CAGAGCTGCGGGAGCAATTTGAGGCTGGTTTTATTTGTACAACTGCAGGCTGGGGCCGCTTAACTGAAGG
TGGCGTCCTCTCACAAGTCTTGCAGGAAGTGAATCTGCCTATTTTGACCTGGGAAGAGTGTGTGGCAGCT
CTGTTAACACTAAAGAGGCCCATCAGTGGGAAGACCTTTCTTTGCACAGGTTTTCCTGATGGAGGGAGAG
ACGCATGTCAGGGAGATTCAGGAGGTTCACTCATGTGCCGGAATAAGAAAGGGGCCTGGACTCTGGCTGG
TGTGACTTCCTGGGGTTTGGGCTGTGGTCGAGGCTGGAGAAACAATGTGAGGAAAAGTGATCAAGGATCC
CCTGGGATCTTCACAGACATTAGTAAAGTGCTTCCCTGGATCCACGAACACATCCAAACTGGTAATCGGA
GAAAGAGCTCCAGAGCCTGGTGCAGTGAGCAGGATGTCATAGTCAGCGGGGCTGAGGGGAAGCTGCACTT
CCCAGAAAGCCTCCACCTATATTATGAGAGCAAGCAACGGTGTGTCTGGACCCTGCTGGTACCAGAGGAA
ATGCATGTGTTGCTCAGTTTTTCCCACCTAGATGTTGAGTCTTGTCACCACAGTTACCTGTCAATGTATT
CTTTAGAAGACAGACCCATTGGAAAATTTTGTGGAGAAAGCCTCCCTTCATCCATTCTTATTGGCTCTAA
TTCTCTAAGGCTGAAATTCGTCTCTGATGCCACAGATAATGCAGCTGGGTTTAATCTTACCTATAAAGCT
CTTAAACCAAACTACATTCCTGATTCAGGTTGCAGTTACTTAACTGTCCTTTTTGAAGAAGGTCTCATAC
AGAGTCTAAACTATCCTGAAAACTACAGTGACAAGGCTAACTGTGACTGGATTTTTCAAGCCTCCAAACA
TCACCTAATTAAGCTTTCATTTCAGAGTCTGGAAATAGAAGAAAGTGGAGACTGCACTTCCGACTATGTG
ACAGTGCACAGCGATGTAGAAAGGAAGAAGGAAATAGCTCGGCTGTGTGGCTATGATGTCCCCACCCCTG
TGCTGAGCCCCTCCAGCATCATGCTCATCAGCTTCCAATCAGATGAAAACGGGACCTGCAGGGGCTTTCA
GGCTACAGTCTCCTTCATTCCTAAAGCAGTATACCCAGATTTAAACATCTCCATATCAGAGGATGAATCA
ATGTTTCTGGAGACATGA

Translation (565 aa):
MLISRNKLILLLGIVFFERGKSATLSLPKAPSCGQSLVKVQPWNYFNIFSRILGGSQVEKGSYPWQVSLK
QRQKHICGGSIVSPQWVITAAHCIANRNIVSTLNVTAGEYDLSQTDPGEQTLTIETVIIHPHFSTKKPMD
YDIALLKMAGAFQFGHFVGPICLPELREQFEAGFICTTAGWGRLTEGGVLSQVLQEVNLPILTWEECVAA
LLTLKRPISGKTFLCTGFPDGGRDACQGDSGGSLMCRNKKGAWTLAGVTSWGLGCGRGWRNNVRKSDQGS
PGIFTDISKVLPWIHEHIQTGNRRKSSRAWCSEQDVIVSGAEGKLHFPESLHLYYESKQRCVWTLLVPEE
MHVLLSFSHLDVESCHHSYLSMYSLEDRPIGKFCGESLPSSILIGSNSLRLKFVSDATDNAAGFNLTYKA
LKPNYIPDSGCSYLTVLFEEGLIQSLNYPENYSDKANCDWIFQASKHHLIKLSFQSLEIEESGDCTSDYV
TVHSDVERKKEIARLCGYDVPTPVLSPSSIMLISFQSDENGTCRGFQATVSFIPKAVYPDLNISISEDES
MFLET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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