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Report for CCDS30793.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30793.1 Public Homo sapiens 1 MYBPHL 24 110 108 CCDS HistoryNCBI Gene:343263Re-query CCDS DB by CCDS ID:30793.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30793.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357155.2 ENSP00000349678.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357155.2Link to Ensembl Protein Viewer:ENSP00000349678.1Re-query CCDS DB by Nucleotide ID:ENST00000357155Re-query CCDS DB by Protein ID:ENSP00000349678
Original member Current member NCBI NM_001010985.3 NP_001010985.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001010985.3Link to Protein Sequence:NP_001010985.2Re-query CCDS DB by Nucleotide ID:NM_001010985Re-query CCDS DB by Protein ID:NP_001010985Link to BLAST:NP_001010985.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010985.2 354 A2RUH7-1 354 100% 0 0

Chromosomal Locations for CCDS 30793.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 109294239 109294249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109295111 109295297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109296234 109296370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109296783 109296942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109297050 109297189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109297422 109297617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109298169 109298257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109306847 109306991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1065 nt):
ATGGAGGCAGCCACAGCTCCGGAGGTGGCCGCAGGATCCAAGCTGAAGGTGAAAGAAGCCAGCCCAGCGG
ATGCTGAACCACCCCAGGCTTCACCTGGACAGGGGGCTGGCAGCCCCACTCCCCAGCTCCTGCCCCCTAT
AGAAGAGCACCCCAAGATCTGGCTACCTCGGGCCCTGAGGCAGACCTACATCCGGAAGGTTGGGGACACA
GTGAACCTACTAATCCCATTCCAGGGCAAGCCCAAACCTCAAGCCATCTGGACACATGATGGCTGTGCCT
TGGACACCAGGCGTGTGAGTGTGCGGAATGGGGAGCAAGACTCCATCCTCTTCATCCGAGAAGCCCAACG
TGCTGACTCAGGTCGCTACCAACTCCGCGTGCAGCTGGGTGGGCTGGAGGCCACCGCCACCATTGACATC
CTGGTGATTGAGAGGCCAGGCCCTCCTCAGAGTATTAAGCTGGTGGACGTTTGGGGCTTCAGCGCTACAC
TGGAATGGACACCGCCCCAAGATACGGGGAATACAGCACTTCTGGGATACACGGTGCAGAAGGCTGACAC
AAAATCCGGGCTGTGGTTCACGGTGCTGGAGCACTATCACCGCACCAGCTGCATCGTCTCTGACCTCATC
ATCGGCAACTCCTATGCCTTCCGTGTCTTTGCTGAAAACCAGTGCGGACTCAGTGAAACAGCCCCCATCA
CTACGGACCTCGCCCACATCCAGAAAGCAGCTACTGTTTACAAGACCAAGGGGTTTGCCCAACGAGACTT
CTCTGAAGCCCCAAAGTTTACCCAGCCTCTGGCCGACTGCACTACAGTCACCGGCTATAATACCCAGCTC
TTCTGCTGTGTCCGCGCCTCTCCCCGGCCCAAGATCATCTGGCTGAAGAACAAGATGGATATCCAAGGCA
ACCCTAAGTACAGAGCCCTGACTCACCTGGGAATCTGCTCCCTAGAGATCCGCAAGCCGGGTCCCTTTGA
TGGAGGCATCTATACCTGCAAGGCGGTGAACCCCCTAGGGGAGGCATCTGTGGACTGTCGGGTGGATGTG
AAAGTTCCTAATTGA

Translation (354 aa):
MEAATAPEVAAGSKLKVKEASPADAEPPQASPGQGAGSPTPQLLPPIEEHPKIWLPRALRQTYIRKVGDT
VNLLIPFQGKPKPQAIWTHDGCALDTRRVSVRNGEQDSILFIREAQRADSGRYQLRVQLGGLEATATIDI
LVIERPGPPQSIKLVDVWGFSATLEWTPPQDTGNTALLGYTVQKADTKSGLWFTVLEHYHRTSCIVSDLI
IGNSYAFRVFAENQCGLSETAPITTDLAHIQKAATVYKTKGFAQRDFSEAPKFTQPLADCTTVTGYNTQL
FCCVRASPRPKIIWLKNKMDIQGNPKYRALTHLGICSLEIRKPGPFDGGIYTCKAVNPLGEASVDCRVDV
KVPN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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