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Report for CCDS59062.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59062.1 Public Homo sapiens 7 CROT 24 110 108 CCDS HistoryNCBI Gene:54677Re-query CCDS DB by CCDS ID:59062.1Re-query CCDS DB by GeneID:54677See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59062.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000412227.6 ENSP00000404867.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000412227.6Link to Ensembl Protein Viewer:ENSP00000404867.2Re-query CCDS DB by Nucleotide ID:ENST00000412227Re-query CCDS DB by Protein ID:ENSP00000404867
Original member Current member NCBI NM_001243745.3 NP_001230674.1 Accepted alive Link to Nucleotide Sequence:NM_001243745.3Link to Protein Sequence:NP_001230674.1Re-query CCDS DB by Nucleotide ID:NM_001243745Re-query CCDS DB by Protein ID:NP_001230674Link to BLAST:NP_001230674.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001230674.1 87 Q9UKG9-2 87 100% 0 0

Chromosomal Locations for CCDS 59062.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 87349069 87349183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87359206 87359354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (264 nt):
ATGGAAAATCAATTGGCTAAATCAACTGAAGAACGAACATTTCAGTACCAGGATTCTCTTCCATCACTGC
CTGTTCCTTCACTTGAAGAATCATTAAAAAAATACCTTGAATCAGTGAAACCATTTGCAAATCAAGAAGA
ATATAAGAAAACTGAAGAAATAGTTCAAAAATTTCAAAGTGGGATTGGAGAAAAATTGCACCAGAAATTG
CTTGAAAGAGCAAAAGGAAAAAGAAATTGGGTATTTGTTGTTATAATTGAATAA

Translation (87 aa):
MENQLAKSTEERTFQYQDSLPSLPVPSLEESLKKYLESVKPFANQEEYKKTEEIVQKFQSGIGEKLHQKL
LERAKGKRNWVFVVIIE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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