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Report for CCDS34163.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34163.1 Public Homo sapiens 5 ACTBL2 24 110 108 CCDS HistoryNCBI Gene:345651Re-query CCDS DB by CCDS ID:34163.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34163.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000423391.3 ENSP00000416706.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000423391.3Link to Ensembl Protein Viewer:ENSP00000416706.1Re-query CCDS DB by Nucleotide ID:ENST00000423391Re-query CCDS DB by Protein ID:ENSP00000416706
Original member Current member NCBI NM_001017992.4 NP_001017992.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001017992.4Link to Protein Sequence:NP_001017992.1Re-query CCDS DB by Nucleotide ID:NM_001017992Re-query CCDS DB by Protein ID:NP_001017992Link to BLAST:NP_001017992.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001017992.1 376 Q562R1 376 100% 0 0

Chromosomal Locations for CCDS 34163.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 57481577 57482707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1131 nt):
ATGACTGACAATGAGCTGTCTGCCTTGGTAGTGGATAATGGGTCAGGGATGTGCAAGGCAGGCTTTGGTG
GTGACGATGCCCCCCGGGCTGTGTTCCCCTCCATGATAGGGCGTCCTCGACACCAGGGCGTTATGGTAGG
CATGGGCCAGAAGGACTGCTACGTGGGAGATGAGGCTCAGAGCAAGAGAGGCGTCCTGACCCTGAAGTAT
CCTATCGAGCATGGAGTGGTCACCAACTGGGACGATATGGAAAAGATCTGGTACCACACATTCTACAATG
AGCTCCGTGTGGCACCAGATGAGCATCCCATCCTCCTCACCGAGGCACCCCTGAACCCCAAGATCAACCG
GGAAAAGATGACTCAGATCATGTTCGAGGCTTTCAACACACCAGCCATGTATGTCGCCATCCAGGCTGTG
CTGTCCCTCTATGCCTCAGGACGGACCACAGGCATCGTGATGGATTCTGGGGATGGGGTCACTCACATCG
TGCCCATCTATGAAGGTTATGCCCTGCCTCATGCCATTCTACGCCTGGATCTGGCAGGGAGAGACCTGAC
TGATTACCTCATGAAGATCCTGACAGAGCGAGGCTATAACTTCACCACCACTGCTGAGCGGGAGATTGTG
CGAGATGTCAAAGAGAAGCTGTGCTACGTAGCCCTGGACTTTGAGCAGGAGATGGTCAGGGCAGCCGCAT
CCTCCTCACCGGAACGGAGCTATGAACTTCCTGATGGGCAGGTGATCACCATTGGGAATGAACGCTTCCG
ATGCCCTGAAGCCATTTTCCAGCCTTCCTTTCTGGGCATTGAGTCCAGTGGGATCCATGAGACAACCTTC
AACTCTATCATGAAGTGCGATGTGGATATTCGCAAGGATCTCTATGCCAACACCGTGTTATCTGGAGGGA
GCACCATGTACCCAGGCATTGCTGACAGGATGCAGAAAGAAATCATAACCCTGGCACCCAGCACCATGAA
AATCAAGATCATAGCTCCCCCAGAGCGGAAGTATTCTGTTTGGATTGGGGGCTCCATCCTTGCCAGCCTG
TCCACATTCCAGCAGATGTGGATCAGTAAGCAGGAATATGATGAGGCTGGTCCTCCTATCGTTCACAGAA
AATGTTTCTGA

Translation (376 aa):
MTDNELSALVVDNGSGMCKAGFGGDDAPRAVFPSMIGRPRHQGVMVGMGQKDCYVGDEAQSKRGVLTLKY
PIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREKMTQIMFEAFNTPAMYVAIQAV
LSLYASGRTTGIVMDSGDGVTHIVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYNFTTTAEREIV
RDVKEKLCYVALDFEQEMVRAAASSSPERSYELPDGQVITIGNERFRCPEAIFQPSFLGIESSGIHETTF
NSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEIITLAPSTMKIKIIAPPERKYSVWIGGSILASL
STFQQMWISKQEYDEAGPPIVHRKCF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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