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Report for CCDS43933.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
43933.1 |
Public |
Homo sapiens |
X |
ZNF81 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:347344](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:43933.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome X in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 43933.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000338637.13 |
ENSP00000341151.7 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000338637.13](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000341151.7](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000338637](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000341151](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000376954.6 |
ENSP00000366153.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000376954.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000366153.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000376954](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000366153](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001378152.1 |
NP_001365081.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001378152.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001365081.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001378152](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001365081](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001365081.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001378153.1 |
NP_001365082.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001378153.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001365082.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001378153](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001365082](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001365082.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_007137.5 |
NP_009068.2 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_007137.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_009068.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_007137](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_009068](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_009068.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 43933.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1986 nt): ATGCCAGCTAACGAGGACGCTCCCCAGCCAGGGGAACATGGCAGTGCCTGTGAGGTATCAGTGTCATTTG AGGATGTGACTGTGGACTTCAGTAGAGAGGAGTGGCAGCAACTGGACTCTACTCAAAGACGCCTGTACCA GGATGTAATGTTGGAGAACTACAGCCACCTGCTCTCAGTGGGGTTCGAAGTTCCTAAACCAGAGGTCATC TTCAAGTTGGAGCAAGGAGAGGGGCCATGGACATTGGAAGGGGAAGCCCCACATCAGAGCTGTTCAGATG GGAAATTTGGAATTAAGCCTTCCCAGAGGAGAATTTCTGGGAAATCTACATTTCATAGTGAAATGGAGGG TGAAGACACAAGAGATGATTCATTATACTCTATTTTAGAAGAATTGTGGCAAGATGCTGAACAGATAAAG AGATGTCAGGAAAAACACAACAAACTTCTGAGTCGCACTACTTTCCTCAATAAGAAAATATTGAATACAG AGTGGGATTATGAATATAAAGACTTTGGAAAATTTGTTCATCCAAGCCCAAATCTCATTCTTTCACAGAA AAGACCCCATAAACGTGATTCATTTGGGAAGAGTTTTAAGCATAATTTAGACTTACATATTCATAATAAA AGCAATGCAGCAAAGAACCTGGATAAAACTATTGGGCATGGTCAAGTTTTTACCCAGAACTCTTCTTATA GTCACCACGAAAATACACATACAGGAGTGAAGTTCTGTGAACGTAATCAATGTGGAAAAGTCCTCAGCCT CAAACACTCACTCAGTCAAAATGTGAAATTTCCCATTGGAGAGAAAGCAAACACATGTACTGAATTTGGG AAGATCTTCACCCAGAGGTCACATTTCTTTGCTCCTCAAAAAATTCATACTGTGGAAAAACCTCATGAGC TTAGCAAATGTGTAAATGTTTTTACACAGAAGCCACTACTCAGTATATATCTGAGAGTTCATAGAGATGA AAAACTCTACATATGTACTAAATGTGGGAAGGCCTTCATCCAGAATTCAGAATTAATTATGCATGAGAAA ACTCATACTAGAGAGAAACCCTATAAATGCAATGAATGTGGGAAATCATTTTTCCAGGTGTCATCTCTAC TCAGGCATCAGACAACTCATACTGGAGAAAAACTCTTTGAATGCAGTGAATGTGGTAAAGGCTTCTCCCT GAACTCAGCCCTCAATATACATCAGAAAATTCACACTGGAGAGAGACATCACAAATGCAGTGAGTGTGGG AAAGCCTTTACCCAAAAATCAACACTCAGGATGCATCAGAGAATTCATACAGGAGAGAGGTCCTATATCT GTACTCAATGTGGGCAGGCCTTCATCCAGAAGGCACACTTGATTGCACATCAAAGAATTCATACTGGAGA GAAGCCTTATGAATGCAGTGACTGTGGGAAATCTTTCCCTTCTAAGTCACAACTCCAGATGCATAAGAGA ATTCATACAGGAGAGAAACCCTATATATGCACTGAATGTGGGAAGGCTTTCACCAACAGGTCAAATCTCA ATACTCACCAGAAGTCTCATACTGGAGAAAAGTCTTATATATGTGCTGAATGTGGGAAGGCCTTCACCGA CAGGTCAAATTTCAATAAACACCAGACCATTCACACTGGAGAGAAACCCTATGTTTGTGCTGATTGTGGG AGGGCCTTCATCCAGAAGTCAGAGTTGATTACACATCAGAGAATTCATACTACAGAGAAGCCTTATAAAT GTCCTGACTGTGAGAAATCCTTCTCCAAGAAACCACATCTCAAAGTACATCAACGAATTCACACAGGGGA GAAACCATATATATGTGCAGAATGTGGGAAAGCCTTCACTGATAGGTCAAATTTCAATAAACATCAGACA ATTCATACTGGAGATAAACCGTATAAATGCAGCGACTGTGGAAAGGGGTTCACCCAGAAATCAGTTCTCA GTATGCATCGCAATATTCATACATGA
Translation (661 aa): MPANEDAPQPGEHGSACEVSVSFEDVTVDFSREEWQQLDSTQRRLYQDVMLENYSHLLSVGFEVPKPEVI FKLEQGEGPWTLEGEAPHQSCSDGKFGIKPSQRRISGKSTFHSEMEGEDTRDDSLYSILEELWQDAEQIK RCQEKHNKLLSRTTFLNKKILNTEWDYEYKDFGKFVHPSPNLILSQKRPHKRDSFGKSFKHNLDLHIHNK SNAAKNLDKTIGHGQVFTQNSSYSHHENTHTGVKFCERNQCGKVLSLKHSLSQNVKFPIGEKANTCTEFG KIFTQRSHFFAPQKIHTVEKPHELSKCVNVFTQKPLLSIYLRVHRDEKLYICTKCGKAFIQNSELIMHEK THTREKPYKCNECGKSFFQVSSLLRHQTTHTGEKLFECSECGKGFSLNSALNIHQKIHTGERHHKCSECG KAFTQKSTLRMHQRIHTGERSYICTQCGQAFIQKAHLIAHQRIHTGEKPYECSDCGKSFPSKSQLQMHKR IHTGEKPYICTECGKAFTNRSNLNTHQKSHTGEKSYICAECGKAFTDRSNFNKHQTIHTGEKPYVCADCG RAFIQKSELITHQRIHTTEKPYKCPDCEKSFSKKPHLKVHQRIHTGEKPYICAECGKAFTDRSNFNKHQT IHTGDKPYKCSDCGKGFTQKSVLSMHRNIHT
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