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Report for CCDS65233.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
65233.1 Public Homo sapiens X MAGEB5 24 110 108 CCDS HistoryNCBI Gene:347541Re-query CCDS DB by CCDS ID:65233.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 65233.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000602297.1 ENSP00000473493.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000602297.1Link to Ensembl Protein Viewer:ENSP00000473493.1Re-query CCDS DB by Nucleotide ID:ENST00000602297Re-query CCDS DB by Protein ID:ENSP00000473493
Original member Current member NCBI NM_001271752.1 NP_001258681.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001271752.1Link to Protein Sequence:NP_001258681.1Re-query CCDS DB by Nucleotide ID:NM_001271752Re-query CCDS DB by Protein ID:NP_001258681Link to BLAST:NP_001258681.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258681.1 275 Q9BZ81 275 100% 0 0

Chromosomal Locations for CCDS 65233.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 26217302 26218129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (828 nt):
ATGACTTCTGCAGGTGTTTTTAATGCAGGATCTGACGAAAGGGCTAACAGTAGAGATGAGGAGTACCCAT
GTTCCTCAGAGGTCTCACCCTCCACTGAGAGTTCATGCAGCAATTTCATAAATATTAAGGTGGGTTTGTT
GGAGCAGTTCCTGCTCTACAAGTTCAAAATGAAACAGCGTATTTTGAAGGAAGATATGCTGAAGATTGTC
AACCCAAGATACCAAAACCAGTTTGCTGAGATTCACAGAAGAGCTTCTGAGCACATTGAGGTTGTCTTTG
CAGTTGACTTGAAGGAAGTCAACCCAACTTGTCACTTATATGACCTTGTCAGCAAGCTGAAACTCCCCAA
CAATGGGAGGATTCATGTTGGCAAAGTGTTACCCAAGACTGGTCTCCTCATGACTTTCCTGGTTGTGATC
TTCCTGAAAGGCAACTGTGCCAACAAGGAAGATACCTGGAAATTTCTGGATATGATGCAAATATATGATG
GGAAGAAGTACTACATCTATGGAGAGCCCAGGAAGCTCATCACTCAGGATTTCGTGAGGCTAACGTACCT
GGAGTACCACCAGGTGCCCTGCAGTTATCCTGCACACTATCAATTCCTTTGGGGTCCAAGAGCCTATACT
GAAACCAGCAAGATGAAAGTCCTGGAATATTTGGCCAAGGTCAATGATATTGCTCCAGGTGCCTTCTCAT
CACAATATGAAGAGGCTTTGCAAGATGAGGAAGAGAGCCCAAGCCAGAGATGCAGCCGAAACTGGCACTA
CTGCAGTGGCCAAGACTGTCTCAGGGCGAAGTTCAGCAGCTTCTCTCAACCCTATTGA

Translation (275 aa):
MTSAGVFNAGSDERANSRDEEYPCSSEVSPSTESSCSNFINIKVGLLEQFLLYKFKMKQRILKEDMLKIV
NPRYQNQFAEIHRRASEHIEVVFAVDLKEVNPTCHLYDLVSKLKLPNNGRIHVGKVLPKTGLLMTFLVVI
FLKGNCANKEDTWKFLDMMQIYDGKKYYIYGEPRKLITQDFVRLTYLEYHQVPCSYPAHYQFLWGPRAYT
ETSKMKVLEYLAKVNDIAPGAFSSQYEEALQDEEESPSQRCSRNWHYCSGQDCLRAKFSSFSQPY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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