NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS45071.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45071.1 Public Homo sapiens 13 TMEM255B 24 110 108 CCDS HistoryNCBI Gene:348013Re-query CCDS DB by CCDS ID:45071.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45071.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375353.5 ENSP00000364502.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375353.5Link to Ensembl Protein Viewer:ENSP00000364502.3Re-query CCDS DB by Nucleotide ID:ENST00000375353Re-query CCDS DB by Protein ID:ENSP00000364502
Original member Current member NCBI NM_182614.4 NP_872420.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182614.4Link to Protein Sequence:NP_872420.1Re-query CCDS DB by Nucleotide ID:NM_182614Re-query CCDS DB by Protein ID:NP_872420Link to BLAST:NP_872420.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_872420.1 326 Q8WV15 326 100% 0 0

Chromosomal Locations for CCDS 45071.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 113759270 113759315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113766115 113766257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113769098 113769160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113795148 113795237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113799339 113799419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113800827 113800912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113801653 113801812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113804885 113805028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113811736 113811903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (981 nt):
ATGCAGCCGCCGGTGCCCGGGCCCCTGGGCCTGCTGGACCCCGCAGAAGGGCTTTCGAGGAGGAAGAAGA
CGTCGCTCTGGTTTGTGGGGTCTCTGCTGCTGGTGTCCGTCCTCATAGTCACCGTCGGGCTGGCTGCCAC
CACCAGGACGGAGAATGTGACCGTTGGGGGCTACTACCCAGGGATCATTCTCGGCTTTGGATCTTTCTTA
GGAATTATTGGCATCAACTTGGTGGAGAATAGAAGGCAAATGCTGGTGGCAGCGATCGTGTTTATCAGTT
TTGGCGTGGTGGCCGCCTTCTGCTGCGCCATCGTGGACGGCGTATTTGCAGCACAGCACATTGAACCGAG
GCCCCTCACCACGGGAAGATGCCAGTTTTACTCCAGTGGGGTGGGGTACTTGTACGATGTCTACCAGACA
GAGGTCACCTGTCACTCCCTGGACGGCAAGTGCCAGCTGAAGGTGAGAAGCAACACCTGTTACTGCTGTG
ACCTCTATGCCTGCGGGAGCGCAGAGCCCTCGCCCGCCTACTATGAGTTCATCGGCGTCAGCGGCTGCCA
GGACGTGCTGCACCTGTACCGCCTGCTCTGGGCCTCTGCAGTTCTGAACGTCCTGGGCCTGTTCCTGGGC
ATCATCACCGCCGCCGTCCTGGGGGCCTTCAAGGACATGGTGCCTCTGTCCCAGCTGGCCTATGGCCCAG
CCGTCCCACCACAGACCCTCTACAACCCCGCCCAGCAGATCCTGGCCTACGCAGGCTTCCGCCTGACGCC
CGAGCCCGTCCCGACCTGCTCGTCCTACCCTCTGCCCCTTCAGCCCTGCAGCCGCTTCCCAGTTGCGCCC
TCCTCTGCCCTGGCTTCGTCTGAGGACCTGCAGCCCCCTTCTCCAAGCAGCTCTGGCTCTGGGCTTCCCG
GCCAGGCTCCACCGTGCTACGCACCCACCTACTTTCCCCCGGGGGAGAAGCCACCCCCCTACGCACCCTG
A

Translation (326 aa):
MQPPVPGPLGLLDPAEGLSRRKKTSLWFVGSLLLVSVLIVTVGLAATTRTENVTVGGYYPGIILGFGSFL
GIIGINLVENRRQMLVAAIVFISFGVVAAFCCAIVDGVFAAQHIEPRPLTTGRCQFYSSGVGYLYDVYQT
EVTCHSLDGKCQLKVRSNTCYCCDLYACGSAEPSPAYYEFIGVSGCQDVLHLYRLLWASAVLNVLGLFLG
IITAAVLGAFKDMVPLSQLAYGPAVPPQTLYNPAQQILAYAGFRLTPEPVPTCSSYPLPLQPCSRFPVAP
SSALASSEDLQPPSPSSSGSGLPGQAPPCYAPTYFPPGEKPPPYAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH