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Report for CCDS8938.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8938.1 Public Homo sapiens 12 INHBC 24 110 108 CCDS HistoryNCBI Gene:3626Re-query CCDS DB by CCDS ID:8938.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8938.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309668.3 ENSP00000308716.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309668.3Link to Ensembl Protein Viewer:ENSP00000308716.2Re-query CCDS DB by Nucleotide ID:ENST00000309668Re-query CCDS DB by Protein ID:ENSP00000308716
Original member Current member NCBI NM_005538.4 NP_005529.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005538.4Link to Protein Sequence:NP_005529.1Re-query CCDS DB by Nucleotide ID:NM_005538Re-query CCDS DB by Protein ID:NP_005529Link to BLAST:NP_005529.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005529.1 352 P55103 352 100% 0 0

Chromosomal Locations for CCDS 8938.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 57434887 57435199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57449277 57450022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1059 nt):
ATGACCTCCTCATTGCTTCTGGCCTTTCTCCTCCTGGCTCCAACCACAGTGGCCACTCCCAGAGCTGGCG
GTCAGTGTCCAGCATGTGGGGGGCCCACCTTGGAACTGGAGAGCCAGCGGGAGCTGCTTCTTGATCTGGC
CAAGAGAAGCATCTTGGACAAGCTGCACCTCACCCAGCGCCCAACACTGAACCGCCCTGTGTCCAGAGCT
GCTTTGAGGACTGCACTGCAGCACCTCCACGGGGTCCCACAGGGGGCACTTCTAGAGGACAACAGGGAAC
AGGAATGTGAAATCATCAGCTTTGCTGAGACAGGCCTCTCCACCATCAACCAGACTCGTCTTGATTTTCA
CTTCTCCTCTGATAGAACTGCTGGTGACAGGGAGGTCCAGCAGGCCAGTCTCATGTTCTTTGTGCAGCTC
CCTTCCAATACCACTTGGACCTTGAAAGTGAGAGTCCTTGTGCTGGGTCCACATAATACCAACCTCACCT
TGGCTACTCAGTACCTGCTGGAGGTGGATGCCAGTGGCTGGCATCAACTCCCCCTAGGGCCTGAAGCTCA
AGCTGCCTGCAGCCAGGGGCACCTGACCCTGGAGCTGGTACTTGAAGGCCAGGTAGCCCAGAGCTCAGTC
ATCCTGGGTGGAGCTGCCCATAGGCCTTTTGTGGCAGCCCGGGTGAGAGTTGGGGGCAAACACCAGATTC
ACCGACGAGGCATCGACTGCCAAGGAGGGTCCAGGATGTGCTGTCGACAAGAGTTTTTTGTGGACTTCCG
TGAGATTGGCTGGCACGACTGGATCATCCAGCCTGAGGGCTACGCCATGAACTTCTGCATAGGGCAGTGC
CCACTACACATAGCAGGCATGCCTGGTATTGCTGCCTCCTTTCACACTGCAGTGCTCAATCTTCTCAAGG
CCAACACAGCTGCAGGCACCACTGGAGGGGGCTCATGCTGTGTACCCACGGCCCGGCGCCCCCTGTCTCT
GCTCTATTATGACAGGGACAGCAACATTGTCAAGACTGACATACCTGACATGGTAGTAGAGGCCTGTGGG
TGCAGTTAG

Translation (352 aa):
MTSSLLLAFLLLAPTTVATPRAGGQCPACGGPTLELESQRELLLDLAKRSILDKLHLTQRPTLNRPVSRA
ALRTALQHLHGVPQGALLEDNREQECEIISFAETGLSTINQTRLDFHFSSDRTAGDREVQQASLMFFVQL
PSNTTWTLKVRVLVLGPHNTNLTLATQYLLEVDASGWHQLPLGPEAQAACSQGHLTLELVLEGQVAQSSV
ILGGAAHRPFVAARVRVGGKHQIHRRGIDCQGGSRMCCRQEFFVDFREIGWHDWIIQPEGYAMNFCIGQC
PLHIAGMPGIAASFHTAVLNLLKANTAAGTTGGGSCCVPTARRPLSLLYYDRDSNIVKTDIPDMVVEACG
CS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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