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Report for CCDS32438.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32438.1 Public Homo sapiens 16 ITGAD 24 110 108 CCDS HistoryNCBI Gene:3681Re-query CCDS DB by CCDS ID:32438.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32438.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000389202.3 ENSP00000373854.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000389202.3Link to Ensembl Protein Viewer:ENSP00000373854.2Re-query CCDS DB by Nucleotide ID:ENST00000389202Re-query CCDS DB by Protein ID:ENSP00000373854
Original member Current member NCBI NM_005353.3 NP_005344.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005353.3Link to Protein Sequence:NP_005344.2Re-query CCDS DB by Nucleotide ID:NM_005353Re-query CCDS DB by Protein ID:NP_005344Link to BLAST:NP_005344.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005344.2 1161 Q13349 1161 100% 0 0

Chromosomal Locations for CCDS 32438.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 31393361 31393391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31394236 31394341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31397359 31397462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31397596 31397666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31397795 31397909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31402115 31402245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31403500 31403645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31407515 31407668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31407766 31407916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31408425 31408498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31410395 31410524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31410736 31410878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31411076 31411216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31411308 31411517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31412838 31412968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31413089 31413246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31414451 31414605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31414860 31414991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31416213 31416286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31416505 31416646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31418075 31418191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31418301 31418380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31418481 31418564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31423114 31423192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31423352 31423459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31423571 31423648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31423845 31423958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31424102 31424203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31424467 31424577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31426015 31426128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3486 nt):
ATGACCTTCGGCACTGTGCTTCTTCTGAGTGTCCTGGCTTCTTATCATGGATTCAACCTGGATGTGGAGG
AGCCTACGATCTTCCAGGAGGATGCAGGCGGCTTTGGGCAGAGCGTGGTGCAGTTCGGTGGATCTCGACT
CGTGGTGGGAGCACCCCTGGAGGTGGTGGCGGCCAACCAGACGGGACGGCTGTATGACTGCGCAGCTGCC
ACCGGCATGTGCCAGCCCATCCCGCTGCACATCCGCCCTGAGGCCGTGAACATGTCCTTGGGCCTGACCC
TGGCAGCCTCCACCAACGGCTCCCGGCTCCTGGCCTGTGGCCCGACCCTGCACAGAGTCTGTGGGGAGAA
CTCATACTCAAAGGGTTCCTGCCTCCTGCTGGGCTCGCGCTGGGAGATCATCCAGACAGTCCCCGACGCC
ACGCCAGAGTGTCCACATCAAGAGATGGACATCGTCTTCCTGATTGACGGCTCTGGAAGCATTGACCAAA
ATGACTTTAACCAGATGAAGGGCTTTGTCCAAGCTGTCATGGGCCAGTTTGAGGGCACTGACACCCTGTT
TGCACTGATGCAGTACTCAAACCTCCTGAAGATCCACTTCACCTTCACCCAATTCCGGACCAGCCCGAGC
CAGCAGAGCCTGGTGGATCCCATCGTCCAACTGAAAGGCCTGACGTTCACGGCCACGGGCATCCTGACAG
TGGTGACACAGCTATTTCATCATAAGAATGGGGCCCGAAAAAGTGCCAAGAAGATCCTCATTGTCATCAC
AGATGGGCAGAAGTACAAAGACCCCCTGGAATACAGTGATGTCATCCCCCAGGCAGAGAAGGCTGGCATC
ATCCGCTACGCTATCGGGGTGGGACACGCTTTCCAGGGACCCACTGCCAGGCAGGAGCTGAATACCATCA
GCTCAGCGCCTCCGCAGGACCACGTGTTCAAGGTGGACAACTTTGCAGCCCTTGGCAGCATCCAGAAGCA
GCTGCAGGAGAAGATCTATGCAGTTGAGGGAACCCAGTCCAGGGCAAGCAGCTCCTTCCAGCACGAGATG
TCCCAAGAAGGCTTCAGCACAGCCCTCACAATGGATGGCCTCTTCCTGGGGGCTGTGGGGAGCTTTAGCT
GGTCTGGAGGTGCCTTCCTGTATCCCCCAAATATGAGCCCCACCTTCATCAACATGTCTCAGGAGAATGT
GGACATGAGGGACTCTTACCTGGGTTACTCCACCGAGCTAGCCCTGTGGAAGGGGGTACAGAACCTGGTC
CTGGGGGCCCCCCGCTACCAGCATACCGGGAAGGCTGTCATCTTCACCCAGGTGTCCAGGCAATGGAGGA
AGAAGGCCGAAGTCACAGGGACGCAGATCGGCTCCTACTTCGGGGCCTCCCTCTGCTCTGTGGATGTGGA
CAGCGATGGCAGCACCGACCTGATCCTCATTGGGGCCCCCCATTACTATGAGCAGACCCGAGGGGGCCAG
GTGTCCGTGTGTCCCTTGCCTAGGGGGAGGGTGCAGTGGCAGTGTGACGCTGTTCTCCGTGGTGAGCAGG
GCCACCCCTGGGGCCGCTTTGGGGCAGCCCTGACAGTGTTGGGGGATGTGAATGAGGACAAGCTGATAGA
CGTGGCCATTGGGGCCCCGGGAGAGCAGGAGAACCGGGGTGCTGTCTACCTGTTTCACGGAGCCTCAGAA
TCCGGCATCAGCCCCTCCCACAGCCAGCGGATTGCCAGCTCCCAGCTCTCCCCCAGGCTGCAGTATTTTG
GGCAGGCGCTGAGTGGGGGTCAGGACCTCACCCAGGATGGACTGATGGACCTGGCCGTGGGGGCCCGGGG
CCAGGTGCTCCTGCTCAGGAGTCTGCCGGTGCTGAAAGTGGGGGTGGCCATGAGATTCAGCCCTGTGGAG
GTGGCCAAGGCTGTGTACCGGTGCTGGGAAGAGAAGCCCAGTGCCCTGGAAGCTGGGGACGCCACCGTCT
GTCTCACCATCCAGAAAAGCTCACTGGACCAGCTAGGTGACATCCAAAGCTCTGTCAGGTTTGATCTGGC
ACTGGACCCAGGTCGTCTGACTTCTCGTGCCATTTTCAATGAAACCAAGAACCCCACTTTGACTCGAAGA
AAAACCCTGGGACTGGGGATTCACTGTGAAACCCTGAAGCTGCTTTTGCCAGATTGTGTGGAGGATGTGG
TGAGCCCCATCATTCTGCACCTCAACTTCTCACTGGTGAGAGAGCCCATCCCCTCCCCCCAGAACCTGCG
TCCTGTGCTGGCCGTGGGCTCACAAGACCTCTTCACTGCTTCTCTCCCCTTCGAGAAGAACTGTGGGCAA
GATGGCCTCTGTGAAGGGGACCTGGGTGTCACCCTCAGCTTCTCAGGCCTGCAGACCCTGACCGTGGGGA
GCTCCCTGGAGCTCAACGTGATTGTGACTGTGTGGAACGCAGGTGAGGATTCCTACGGAACCGTGGTCAG
CCTCTACTATCCAGCAGGGCTGTCGCACCGACGGGTGTCAGGAGCCCAGAAGCAGCCCCATCAGAGTGCC
CTGCGCCTGGCATGTGAGACAGTGCCCACTGAGGATGAGGGCCTAAGAAGCAGCCGCTGCAGTGTCAACC
ACCCCATCTTCCATGAGGGCTCTAACGGCACCTTCATAGTCACATTCGATGTCTCCTACAAGGCCACCCT
GGGAGACAGGATGCTTATGAGGGCCAGTGCAAGCAGTGAGAACAATAAGGCTTCAAGCAGCAAGGCCACC
TTCCAGCTGGAGCTCCCGGTGAAGTATGCAGTCTACACCATGATCAGCAGGCAGGAAGAATCCACCAAGT
ACTTCAACTTTGCAACCTCCGATGAGAAGAAAATGAAAGAGGCTGAGCATCGATACCGTGTGAATAACCT
CAGCCAGCGAGATCTGGCCATCAGCATTAACTTCTGGGTTCCTGTCCTGCTGAACGGGGTGGCTGTGTGG
GATGTGGTCATGGAGGCCCCATCTCAGAGTCTCCCCTGTGTTTCAGAGAGAAAACCTCCCCAGCATTCTG
ACTTCCTGACCCAGATTTCAAGAAGTCCCATGCTGGACTGCTCCATTGCTGACTGCCTGCAGTTCCGCTG
TGACGTCCCCTCCTTCAGCGTCCAGGAGGAGCTGGATTTCACCCTGAAGGGCAATCTCAGTTTCGGCTGG
GTCCGCGAGACATTGCAGAAGAAGGTGTTGGTCGTGAGTGTGGCTGAAATTACGTTCGACACATCCGTGT
ACTCCCAGCTTCCAGGACAGGAGGCATTTATGAGAGCTCAGATGGAGATGGTGCTAGAAGAAGACGAGGT
CTACAATGCCATTCCCATCATCATGGGCAGCTCTGTGGGGGCTCTGCTACTGCTGGCGCTCATCACAGCC
ACACTGTACAAGCTTGGCTTCTTCAAACGCCACTACAAGGAAATGCTGGAGGACAAGCCTGAAGACACTG
CCACATTCAGTGGGGACGATTTCAGCTGTGTGGCCCCAAATGTGCCTTTGTCCTAA

Translation (1161 aa):
MTFGTVLLLSVLASYHGFNLDVEEPTIFQEDAGGFGQSVVQFGGSRLVVGAPLEVVAANQTGRLYDCAAA
TGMCQPIPLHIRPEAVNMSLGLTLAASTNGSRLLACGPTLHRVCGENSYSKGSCLLLGSRWEIIQTVPDA
TPECPHQEMDIVFLIDGSGSIDQNDFNQMKGFVQAVMGQFEGTDTLFALMQYSNLLKIHFTFTQFRTSPS
QQSLVDPIVQLKGLTFTATGILTVVTQLFHHKNGARKSAKKILIVITDGQKYKDPLEYSDVIPQAEKAGI
IRYAIGVGHAFQGPTARQELNTISSAPPQDHVFKVDNFAALGSIQKQLQEKIYAVEGTQSRASSSFQHEM
SQEGFSTALTMDGLFLGAVGSFSWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQNLV
LGAPRYQHTGKAVIFTQVSRQWRKKAEVTGTQIGSYFGASLCSVDVDSDGSTDLILIGAPHYYEQTRGGQ
VSVCPLPRGRVQWQCDAVLRGEQGHPWGRFGAALTVLGDVNEDKLIDVAIGAPGEQENRGAVYLFHGASE
SGISPSHSQRIASSQLSPRLQYFGQALSGGQDLTQDGLMDLAVGARGQVLLLRSLPVLKVGVAMRFSPVE
VAKAVYRCWEEKPSALEAGDATVCLTIQKSSLDQLGDIQSSVRFDLALDPGRLTSRAIFNETKNPTLTRR
KTLGLGIHCETLKLLLPDCVEDVVSPIILHLNFSLVREPIPSPQNLRPVLAVGSQDLFTASLPFEKNCGQ
DGLCEGDLGVTLSFSGLQTLTVGSSLELNVIVTVWNAGEDSYGTVVSLYYPAGLSHRRVSGAQKQPHQSA
LRLACETVPTEDEGLRSSRCSVNHPIFHEGSNGTFIVTFDVSYKATLGDRMLMRASASSENNKASSSKAT
FQLELPVKYAVYTMISRQEESTKYFNFATSDEKKMKEAEHRYRVNNLSQRDLAISINFWVPVLLNGVAVW
DVVMEAPSQSLPCVSERKPPQHSDFLTQISRSPMLDCSIADCLQFRCDVPSFSVQEELDFTLKGNLSFGW
VRETLQKKVLVVSVAEITFDTSVYSQLPGQEAFMRAQMEMVLEEDEVYNAIPIIMGSSVGALLLLALITA
TLYKLGFFKRHYKEMLEDKPEDTATFSGDDFSCVAPNVPLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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