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Report for CCDS58150.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58150.1 Public Homo sapiens 11 TBC1D10C 24 110 108 CCDS HistoryNCBI Gene:374403Re-query CCDS DB by CCDS ID:58150.1Re-query CCDS DB by GeneID:374403See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58150.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312390.9 ENSP00000310193.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000312390.9Link to Ensembl Protein Viewer:ENSP00000310193.6Re-query CCDS DB by Nucleotide ID:ENST00000312390Re-query CCDS DB by Protein ID:ENSP00000310193
Original member Current member EBI ENST00000526387.5 ENSP00000435543.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000526387.5Link to Ensembl Protein Viewer:ENSP00000435543.1Re-query CCDS DB by Nucleotide ID:ENST00000526387Re-query CCDS DB by Protein ID:ENSP00000435543
Original member Current member NCBI NM_001256508.1 NP_001243437.1 Accepted alive Link to Nucleotide Sequence:NM_001256508.1Link to Protein Sequence:NP_001243437.1Re-query CCDS DB by Nucleotide ID:NM_001256508Re-query CCDS DB by Protein ID:NP_001243437Link to BLAST:NP_001243437.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243437.1 310 Q8IV04-2 310 100% 0 0

Chromosomal Locations for CCDS 58150.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 67404203 67404354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67405085 67405184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67405399 67405506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67405595 67405701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67405907 67406017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67406627 67406692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67408979 67409133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67409407 67409540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGGCCCAGGCCCTGGGGGAGGACCTGGTGCAGCCTCCCGAGCTGCAGGATGACTCCAGCTCCTTGGGGT
CCGACTCAGAGCTCAGCGGGCCTGGCCCATATCGCCAGGCCGACCGCTATGGATTCATTGGGGGCAGCTC
AGCAGAGCCAGGGCCGGGCCACCCACCTGCAGACCTCATCCGCCAACGGGAGATGAAGTGGGTGGAGATG
ACCTCGCACTGGGAGAAAACCATGTCCCGGCGGTACAAGAAGGTAAAGATGCAGTGCCGGAAAGGCATCC
CGTCTGCCCTGCGCGCCCGATGCTGGCCCCTGTTGTGTGGGGCCCATGTGTGCCAGAAGAACAGCCCTGG
CACCTATCAGGAGCTGGCAGAGGCCCCTGGAGACCCACAGTGGATGGAGACCATTGGCAGGGACCTGCAC
CGTCAATTCCCTCTGCACGAGATGTTTGTGTCGCCTCAGGGCCACGGCAGGGGCTCCTGCAGGTGCTCAA
GGCCTACACCCTGTATCGACCGGAGCAGGGCTACTGCCAGGCCCAGGGGCCCGTGGCTGCTGTGCTGCTC
ATGCACCTGCCCCCAGAGGAGGCCTTCTGGTGCCTGGTGCAGATCTGTGAGGTCTACCTCCCTGGGTACT
ACGGGCCCCACATGGTGCCAGAGTACTGTTCCGTGTGGGGCTGACACTGGTGCGCCTGGCGCTGGGCACT
GCAGAGCAGCGAGGGGCCTGCCCTGGCCTCCTGGAGACACTGGGAGCCCTTCGAGCCATCCCCCCCGCGC
AGCTGCAGGAGGAGGCCTTCATGTCACAGGTGCACAGCGTGGTGCTGTCAGAGCGGGACCTGCAGCGGGA
GATCAAGGCCCAGCTGGCCCAGCTGCCCGATTCCGCGCCGGGACCCCCGCCCCGGCCACAGGTCCGCCTC
GCCGGGGCCCAAGCCATCTTTGA

Translation (310 aa):
MAQALGEDLVQPPELQDDSSSLGSDSELSGPGPYRQADRYGFIGGSSAEPGPGHPPADLIRQREMKWVEM
TSHWEKTMSRRYKKVKMQCRKGIPSALRARCWPLLCGAHVCQKNSPGTYQELAEAPGDPQWMETIGRDLH
RQFPLHEMFVSPQGHGRGSCRCSRPTPCIDRSRATARPRGPWLLCCSCTCPQRRPSGAWCRSVRSTSLGT
TGPTWCQSTVPCGADTGAPGAGHCRAARGLPWPPGDTGSPSSHPPRAAAGGGLHVTGAQRGAVRAGPAAG
DQGPAGPAARFRAGTPAPATGPPRRGPSHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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