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Report for CCDS12087.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12087.1 Public Homo sapiens 19 PEAK3 24 110 108 CCDS HistoryNCBI Gene:374872Re-query CCDS DB by CCDS ID:12087.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12087.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000342063.5 ENSP00000345102.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000342063.5Link to Ensembl Protein Viewer:ENSP00000345102.3Re-query CCDS DB by Nucleotide ID:ENST00000342063Re-query CCDS DB by Protein ID:ENSP00000345102
Original member Current member NCBI NM_198532.3 NP_940934.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198532.3Link to Protein Sequence:NP_940934.1Re-query CCDS DB by Nucleotide ID:NM_198532Re-query CCDS DB by Protein ID:NP_940934Link to BLAST:NP_940934.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_940934.1 473 Q6ZS72 473 100% 0 0

Chromosomal Locations for CCDS 12087.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 2275680 2276489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 2278584 2279113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 2280850 2280931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1422 nt):
ATGAGCAGCCCGGAGCCCCCCACAGAGCCCCCCGAGCCCGACAACCCCACCTGGTCGACTCAGCCCACGT
ATAGCAACCTTGGTCAGATCCGTGCCCACCTGCTGCCCTCCAAGGCCTGCCGCCTCCGGACCCCTGGGTC
CCTCTCCACCAACCCAGAGCCCCTGCCCCCACCCCTGCCCAAGAAGATCCTAACCCGGACCCAGTCACTG
CCCACCCGCAGGACCCTCCATCCCAGCTCCATCCAAGTACAGCCGCCTCGGAGACCCTTTCTGGGGTCCC
ACAGTGTGGACAAGAGCCAGGCTGCAGTGGGACCAGCCTGTCTCCCTGCAGAGCTGACCTTTGGCCCGGC
TGACGCCCCACTGGGCCTCTCCCTCCGCGATCTGCACAGCCCGGAGGCTGTGCACACTGCACTGGCTGCG
CGGCAGCTGCAGGGCCTCCGTACCATCTATGCCCGGCTCCGTGCCCGGCTCATGGGGGGCCACCCCGGGC
CCTGCCACCCCGGCCACAGCTTCCGCCTCCTAGACAGCTCACCCTGCGCAGAGAGCGGGGACGCCCTGTA
TTACCGCGTGGTGCGCGCGCACGAGGACGCCTGGCACATCCTGGTCGCCAAGGTGCCCAAGCCCGGGGCG
GACGTGCCCCACCCGTGGGGCCTGGAGCTGCAGGCCTCCCTGTCTCCACACTTCAATCTGCAGGGGCTGT
GTGGCCTGGTGCCTGAAGGCACACTGCCCGGGGCGCCCTGGAGAGGCGCAGTGGCGCTGGCAGCCGAGGT
TCCAGAGCGCACGGTGGCGCAGTGGCTGGCGGAGGCCTGCACGCAGCCGCCGGAGGAGTTCGTGTGGGCT
GTGGCCCTGCTGCTGCTGCAGCTGAGCGCGGCCCTGAAGTTCCTGGAGGCGTGGGGCGCGGCCCTAGTCG
AGTTGCGGCCGGAGAACTTGCTGCTGGTGGCACCTCGGGGCTGTGCGACGACGGGGCCCCCACGCCTGCT
CCTCACTGACTTTGGCCGCGTCTGTCTGCAGCCCCCTGGACCCCCGGGATCCCCGGGCCCCCACGCGCCG
CAGCTGGGCAGCCTCCTCCGAGCGCTGCTCAGCCTTGCTGCGCCCTCGACCACGCCTTTGGCCGCGGGCC
TGGAGCTCCTGGCAGCACAGCTGACCCGCTTGCGGCCCTCGGCGTCCCGGACGCGGGGCGCGCTGCAGGC
GCTGCTCTGGGGGCCCGGGCCTGAGCTGCGCGGCCGCGGAGCACCGCTTGGTCCCTGGCTCCGAGCGCTC
GGGCCCTGGCTGCGGGTGCGCCGCGGGCTGCTGGTCCTGCGCCTAGCAGAGCGGGCCGCAGGTGGGGAAG
CTCCCAGCCTCGAGGACTGGCTGTGTTGCGAATACCTGGCCGAGGCCACCGAGTCCTCGATGGGCCAGGC
CCTGGCGCTGCTGTGGGACTGA

Translation (473 aa):
MSSPEPPTEPPEPDNPTWSTQPTYSNLGQIRAHLLPSKACRLRTPGSLSTNPEPLPPPLPKKILTRTQSL
PTRRTLHPSSIQVQPPRRPFLGSHSVDKSQAAVGPACLPAELTFGPADAPLGLSLRDLHSPEAVHTALAA
RQLQGLRTIYARLRARLMGGHPGPCHPGHSFRLLDSSPCAESGDALYYRVVRAHEDAWHILVAKVPKPGA
DVPHPWGLELQASLSPHFNLQGLCGLVPEGTLPGAPWRGAVALAAEVPERTVAQWLAEACTQPPEEFVWA
VALLLLQLSAALKFLEAWGAALVELRPENLLLVAPRGCATTGPPRLLLTDFGRVCLQPPGPPGSPGPHAP
QLGSLLRALLSLAAPSTTPLAAGLELLAAQLTRLRPSASRTRGALQALLWGPGPELRGRGAPLGPWLRAL
GPWLRVRRGLLVLRLAERAAGGEAPSLEDWLCCEYLAEATESSMGQALALLWD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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