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Report for CCDS42958.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42958.1 Public Homo sapiens 21 KRTAP10-5 24 110 108 CCDS HistoryNCBI Gene:386680Re-query CCDS DB by CCDS ID:42958.1See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42958.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000400372.1 ENSP00000383223.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000400372.1Link to Ensembl Protein Viewer:ENSP00000383223.1Re-query CCDS DB by Nucleotide ID:ENST00000400372Re-query CCDS DB by Protein ID:ENSP00000383223
Original member Current member NCBI NM_198694.3 NP_941967.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198694.3Link to Protein Sequence:NP_941967.3Re-query CCDS DB by Nucleotide ID:NM_198694Re-query CCDS DB by Protein ID:NP_941967Link to BLAST:NP_941967.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_941967.3 271 P60370 271 100% 0 0

Chromosomal Locations for CCDS 42958.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 44579763 44580578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (816 nt):
ATGGCCGCGTGCACCATGTCCGTCTGCTCCAGCGCTTGCTCTGACTCCTGGCGAGTGGACGACTGCCCAG
AGAGCTGCTGTGAGCCCCCCTGCGGCACCGCCCCCTGCCTGACCCTGGTCTGCACCCCAGTGAGCTGTGT
GTCCAGCCCCTGCTGCCAGGCGGCCTGTGAGCCCAGCCCCTGCCAATCAGGCTGCACCAGCTCCTGCACG
CCCTCGTGCTGCCAGCCGGCTTGCTGCGCCTCCTCCCCCTGCCAGCAGGCCTGCTGCGTGCCCGTCTGCT
GCAAGCCTGTGTGCTGCCTGCCCACCTGCTCTAAGGATTCCTCTTCATGCTGCCAGCAGTCTAGCTGCCA
GCCAACTTGCTGTGCCTCTTCCTCCTGCCAGCAGTCCTGCTGTGTGCCTGTCTGCTGCAAGCCCGTGTGC
TGTGTGCCCACCTGTTCTGAGGATTCCTCTTCATGCTGCCAGCATTCTAGCTGCCAGCCGACTTGCTGCA
CCTCCTCCCCCTGCCAGCAGTCCTGCTACGTGCCTGTCTGTTGCAAGCCTGTCTGCTGCAAACCCATCTG
CTGTGTGCCCGTCTGCTCTGGGGCTTCCACTTCATGCTGCCAGCAGTCTAGCTGTCAGCCGGCTTGCTGC
ACCACCTCCTGCTGCAGACCCTCCTCCTCCGTGTCCCTCCTCTGCCGCCCCATATGCAGGCCCGCCTGCT
GCCTGCCCATCTCCTCCTGCTGTGCCCCTGCCTCCTCCTACCAGGCCAGCTGCTGCCGCCCGGCCTCCTG
CGTGTCCCTCCTCTGCCGCCCCGCGTGCTCCCCCCTGGCCTGCTGA

Translation (271 aa):
MAACTMSVCSSACSDSWRVDDCPESCCEPPCGTAPCLTLVCTPVSCVSSPCCQAACEPSPCQSGCTSSCT
PSCCQPACCASSPCQQACCVPVCCKPVCCLPTCSKDSSSCCQQSSCQPTCCASSSCQQSCCVPVCCKPVC
CVPTCSEDSSSCCQHSSCQPTCCTSSPCQQSCYVPVCCKPVCCKPICCVPVCSGASTSCCQQSSCQPACC
TTSCCRPSSSVSLLCRPICRPACCLPISSCCAPASSYQASCCRPASCVSLLCRPACSPLAC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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