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Report for CCDS42967.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42967.1 Public Homo sapiens 21 KRTAP10-12 24 110 108 CCDS HistoryNCBI Gene:386685Re-query CCDS DB by CCDS ID:42967.1See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42967.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000400365.3 ENSP00000383216.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000400365.3Link to Ensembl Protein Viewer:ENSP00000383216.3Re-query CCDS DB by Nucleotide ID:ENST00000400365Re-query CCDS DB by Protein ID:ENSP00000383216
Original member Current member NCBI NM_198699.1 NP_941972.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198699.1Link to Protein Sequence:NP_941972.1Re-query CCDS DB by Nucleotide ID:NM_198699Re-query CCDS DB by Protein ID:NP_941972Link to BLAST:NP_941972.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_941972.1 245 P60413 245 100% 0 0

Chromosomal Locations for CCDS 42967.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 44697202 44697939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (738 nt):
ATGTCCGTCTGCTCCAGCGACCTGAGCTATGGCAGCCGCGTCTGCCTTCCTGGTTCCTGTGACTCTTGCT
CCGACTCCTGGCAGGTGGACGACTGCCCAGAGAGCTGCTGTGAGCCCCCCTGCTGCGCCCCGGCCCCCTG
CCTGAGCCTGGTCTGCACCCCAGTGAGCCGTGTATCCAGCCCCTGCTGCCGAGTGACCTGTGAGCCCAGC
CCCTGCCAATCAGGCTGCACCAGCTCCTGCACGCCCTCGTGCTGCCAGCAGTCTAGCTGCCAGCCGGCTT
GCTGCACCTCCTCCCCCTGCCAGCAGGCCTGCTGCGTGCCCGTCTGCTGCAAGACTGTCTGCTGCAAGCC
TGTGTGCTGTATGCCCGTCTGCTGTGGGCCTTCTTCTTCATGCTGCCAGCAGTCTAGCTGCCAGCCAGCT
TGCTGCATCTCCTCCCCGTGTCAACAGTCCTGCTGTGTGCCCGTCTGCTGCAAGCCCATCTGCTGTGTGC
CTGTCTGCTCTGGGGCCTCCTCTCTGTGCTGCCAGCAGTCTAGCTGCCAGCCAGCTTGCTGCACCACCTC
CTGCTGCAGACCCTCCTCCTCCGTGTCCCTCCTCTGCCGCCCTGTGTGCAGACCCGCCCGCCGCGTGCCC
GTCCCCTCCTGCTGTGTCCCCACCTCCTCCTGCCAGCCAAGCTGCGGCCGCCTGGCCTCCTGCGGGTCCC
TCCTCTGCCGCCCCACATGTTCCCGCCTGGCCTGCTGA

Translation (245 aa):
MSVCSSDLSYGSRVCLPGSCDSCSDSWQVDDCPESCCEPPCCAPAPCLSLVCTPVSRVSSPCCRVTCEPS
PCQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCKTVCCKPVCCMPVCCGPSSSCCQQSSCQPA
CCISSPCQQSCCVPVCCKPICCVPVCSGASSLCCQQSSCQPACCTTSCCRPSSSVSLLCRPVCRPARRVP
VPSCCVPTSSCQPSCGRLASCGSLLCRPTCSRLAC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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