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Report for CCDS53585.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53585.1 Public Homo sapiens 10 ARMS2 24 110 108 CCDS HistoryNCBI Gene:387715Re-query CCDS DB by CCDS ID:53585.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53585.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000528446.1 ENSP00000436682.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000528446.1Link to Ensembl Protein Viewer:ENSP00000436682.1Re-query CCDS DB by Nucleotide ID:ENST00000528446Re-query CCDS DB by Protein ID:ENSP00000436682
Original member Current member NCBI NM_001099667.3 NP_001093137.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001099667.3Link to Protein Sequence:NP_001093137.1Re-query CCDS DB by Nucleotide ID:NM_001099667Re-query CCDS DB by Protein ID:NP_001093137Link to BLAST:NP_001093137.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001093137.1 107 P0C7Q2 107 100% 0 0

Chromosomal Locations for CCDS 53585.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 122454728 122455024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 122456907 122456933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (324 nt):
ATGCTGCGCCTATACCCAGGACCGATGGTAACTGAGGCGGAGGGGAAAGGAGGGCCTGAGATGGCAAGTC
TGTCCTCCTCGGTGGTTCCTGTGTCCTTCATTTCCACTCTGCGAGAGTCTGTGCTGGACCCTGGAGTTGG
TGGAGAAGGAGCCAGTGACAAGCAGAGGAGCAAACTGTCTTTATCACACTCCATGATCCCAGCTGCTAAA
ATCCACACTGAGCTCTGCTTACCAGCCTTCTTCTCTCCTGCTGGAACCCAGAGGAGGTTCCAGCAGCCTC
AGCACCACCTGACACTGTCTATCATCCACACTGCAGCAAGGTGA

Translation (107 aa):
MLRLYPGPMVTEAEGKGGPEMASLSSSVVPVSFISTLRESVLDPGVGGEGASDKQRSKLSLSHSMIPAAK
IHTELCLPAFFSPAGTQRRFQQPQHHLTLSIIHTAAR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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