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Report for CCDS14286.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14286.1 Public Homo sapiens X SPACA5 24 110 108 CCDS HistoryNCBI Gene:389852Re-query CCDS DB by CCDS ID:14286.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14286.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304355.9 ENSP00000305847.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000304355.9Link to Ensembl Protein Viewer:ENSP00000305847.5Re-query CCDS DB by Nucleotide ID:ENST00000304355Re-query CCDS DB by Protein ID:ENSP00000305847
Original member Current member EBI ENST00000376940.4 ENSP00000366139.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376940.4Link to Ensembl Protein Viewer:ENSP00000366139.3Re-query CCDS DB by Nucleotide ID:ENST00000376940Re-query CCDS DB by Protein ID:ENSP00000366139
Original member Current member NCBI NM_001394298.1 NP_001381227.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001394298.1Link to Protein Sequence:NP_001381227.1Re-query CCDS DB by Nucleotide ID:NM_001394298Re-query CCDS DB by Protein ID:NP_001381227Link to BLAST:NP_001381227.1
Original member Current member NCBI NM_205856.3 NP_995328.2 Accepted alive Link to Nucleotide Sequence:NM_205856.3Link to Protein Sequence:NP_995328.2Re-query CCDS DB by Nucleotide ID:NM_205856Re-query CCDS DB by Protein ID:NP_995328Link to BLAST:NP_995328.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001381227.1 159 Q96QH8 159 100% 0 0
NP_995328.2 159 Q96QH8 159 100% 0 0

Chromosomal Locations for CCDS 14286.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 48007803 48007947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48008376 48008534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48009366 48009444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48009549 48009645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (480 nt):
ATGAAGGCCTGGGGCACTGTGGTAGTGACCTTGGCCACGCTGATGGTTGTCACTGTGGATGCCAAGATCT
ATGAACGCTGCGAGCTGGCGGCAAGACTGGAGAGAGCAGGGCTGAACGGCTACAAGGGCTACGGCGTTGG
AGACTGGCTGTGCATGGCTCATTATGAGAGTGGCTTTGACACCGCCTTCGTGGACCACAATCCTGATGGC
AGCAGTGAATATGGCATTTTCCAACTGAATTCTGCCTGGTGGTGTGACAATGGCATTACACCCACCAAGA
ACCTCTGCCACATGGATTGTCATGACCTGCTCAATCGCCATATTCTGGATGACATCAGGTGTGCCAAGCA
GATTGTGTCCTCACAGAATGGGCTTTCTGCCTGGACTTCTTGGAGGCTACACTGTTCTGGCCATGATTTA
TCTGAATGGCTCAAGGGGTGTGATATGCATGTGAAAATTGATCCAAAAATTCATCCATGA

Translation (159 aa):
MKAWGTVVVTLATLMVVTVDAKIYERCELAARLERAGLNGYKGYGVGDWLCMAHYESGFDTAFVDHNPDG
SSEYGIFQLNSAWWCDNGITPTKNLCHMDCHDLLNRHILDDIRCAKQIVSSQNGLSAWTSWRLHCSGHDL
SEWLKGCDMHVKIDPKIHP


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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