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Report for CCDS59223.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59223.1 Public Homo sapiens 11 OR52I1 24 110 108 CCDS HistoryNCBI Gene:390037Re-query CCDS DB by CCDS ID:59223.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59223.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000530443.4 ENSP00000436453.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000530443.4Link to Ensembl Protein Viewer:ENSP00000436453.1Re-query CCDS DB by Nucleotide ID:ENST00000530443Re-query CCDS DB by Protein ID:ENSP00000436453
Original member Current member NCBI NM_001005169.1 NP_001005169.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005169.1Link to Protein Sequence:NP_001005169.1Re-query CCDS DB by Nucleotide ID:NM_001005169Re-query CCDS DB by Protein ID:NP_001005169Link to BLAST:NP_001005169.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005169.1 324 Q8NGK6 324 100% 0 0

Chromosomal Locations for CCDS 59223.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 4594039 4595013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (975 nt):
ATGCTGGGTCCAGCTTACAACCACACAATGGAAACCCCTGCCTCCTTCCTCCTTGTGGGTATCCCAGGAC
TGCAATCTTCACATCTTTGGCTGGCTATCTCACTGAGTGCCATGTACATCACAGCCCTGTTAGGAAACAC
CCTCATCGTGACTGCAATCTGGATGGATTCCACTCGGCATGAGCCCATGTATTGCTTTCTGTGTGTTCTG
GCTGCTGTGGACATTGTTATGGCCTCCTCCGTGGTACCCAAGATGGTGAGCATCTTCTGCTCGGGAGACA
GCTCCATCAGCTTTAGTGCTTGTTTCACTCAGATGTTTTTTGTCCACTTAGCCACAGCTGTGGAGACGGG
GCTGCTGCTGACCATGGCTTTTGACCGCTATGTAGCCATCTGCAAGCCTCTACACTACAAGAGAATTCTC
ACGCCTCAAGTGATGCTGGGAATGAGTATGGCCGTCACCATCAGAGCTGTCACATTCATGACTCCACTGA
GTTGGATGATGAATCATCTACCTTTCTGTGGCTCCAATGTGGTTGTCCACTCCTACTGTAAGCACATAGC
TTTGGCCAGGTTAGCATGTGCTGACCCCGTGCCCAGCAGTCTCTACAGTCTGATTGGTTCCTCTCTTATG
GTGGGCTCTGATGTGGCCTTCATTGCTGCCTCCTATATCTTAATTCTCAGGGCAGTATTTGATCTCTCCT
CAAAGACTGCTCAGTTGAAAGCATTAAGCACATGTGGCTCCCATGTGGGGGTTATGGCTTTGTACTATCT
ACCTGGGATGGCATCCATCTATGCGGCCTGGTTGGGGCAGGATATAGTGCCCTTGCACACCCAAGTGCTG
CTAGCTGACCTGTACGTGATCATCCCAGCCACTTTAAATCCCATCATCTATGGCATGAGGACCAAACAAT
TGCTGGAGGGAATATGGAGTTATCTGATGCACTTCCTCTTTGACCACTCCAACCTGGGTTCATGA

Translation (324 aa):
MLGPAYNHTMETPASFLLVGIPGLQSSHLWLAISLSAMYITALLGNTLIVTAIWMDSTRHEPMYCFLCVL
AAVDIVMASSVVPKMVSIFCSGDSSISFSACFTQMFFVHLATAVETGLLLTMAFDRYVAICKPLHYKRIL
TPQVMLGMSMAVTIRAVTFMTPLSWMMNHLPFCGSNVVVHSYCKHIALARLACADPVPSSLYSLIGSSLM
VGSDVAFIAASYILILRAVFDLSSKTAQLKALSTCGSHVGVMALYYLPGMASIYAAWLGQDIVPLHTQVL
LADLYVIIPATLNPIIYGMRTKQLLEGIWSYLMHFLFDHSNLGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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