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Report for CCDS31512.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31512.1 Public Homo sapiens 11 OR5D16 24 110 108 CCDS HistoryNCBI Gene:390144Re-query CCDS DB by CCDS ID:31512.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 31512.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378396.1 ENSP00000367649.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000378396.1Link to Ensembl Protein Viewer:ENSP00000367649.1Re-query CCDS DB by Nucleotide ID:ENST00000378396Re-query CCDS DB by Protein ID:ENSP00000367649
Original member Current member NCBI NM_001005496.1 NP_001005496.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005496.1Link to Protein Sequence:NP_001005496.1Re-query CCDS DB by Nucleotide ID:NM_001005496Re-query CCDS DB by Protein ID:NP_001005496Link to BLAST:NP_001005496.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005496.1 328 Q8NGK9 328 100% 0 0

Chromosomal Locations for CCDS 31512.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 55838752 55839738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (987 nt):
ATGTTTCTGACAGAGAGAAATACGACATCTGAGGCCACATTCACTCTCTTGGGCTTCTCAGATTACCTGG
AACTGCAAATTCCCCTCTTCTTTGTATTTCTGGCAGTCTACGGCTTCAGTGTGGTAGGGAATCTTGGGAT
GATAGTGATCATCAAAATTAACCCAAAATTGCATACCCCCATGTATTTTTTCCTCAACCACCTCTCCTTT
GTGGATTTCTGCTATTCCTCCATCATTGCTCCCATGATGCTGGTGAACCTGGTTGTAGAAGATAGAACCA
TTTCATTCTCAGGATGTTTGGTGCAATTCTTTTTCTTTTGCACCTTTGTAGTGACTGAATTAATTCTATT
TGCGGTGATGGCCTATGACCACTTTGTGGCCATTTGCAATCCTCTGCTCTACACAGTTGCCATCTCCCAG
AAACTCTGTGCCATGCTGGTGGTTGTATTGTATGCATGGGGAGTCGCATGTTCCCTGACACTCGCGTGCT
CTGCTTTAAAGTTATCTTTTCATGGTTTCAACACAATCAATCATTTCTTCTGTGAGTTATCCTCCCTGAT
ATCACTCTCTTACCCTGACTCTTATCTCAGCCAGTTGCTTCTTTTCACTGTTGCCACTTTTAATGAGATA
AGCACACTACTCATCATTCTGACATCTTATGCATTCATCATTGTCACCACCTTGAAGATGCCTTCAGCCA
GTGGGCACCGCAAAGTCTTCTCCACCTGTGCCTCCCACCTGACTGCCATCACCATCTTCCATGGCACCAT
CCTCTTCCTCTACTGTGTACCCAACTCCAAAAACTCCAGGCACACAGTCAAAGTGGCCTCTGTGTTTTAC
ACCGTGGTGATCCCCTTGTTGAATCCCCTGATCTACAGTCTGAGAAATAAAGATGTTAAGGATGCAATCC
GAAAAATAATCAATACAAAATATTTTCATATTAAACATAGGCATTGGTATCCATTTAATTTTGTTATTGA
ACAATAA

Translation (328 aa):
MFLTERNTTSEATFTLLGFSDYLELQIPLFFVFLAVYGFSVVGNLGMIVIIKINPKLHTPMYFFLNHLSF
VDFCYSSIIAPMMLVNLVVEDRTISFSGCLVQFFFFCTFVVTELILFAVMAYDHFVAICNPLLYTVAISQ
KLCAMLVVVLYAWGVACSLTLACSALKLSFHGFNTINHFFCELSSLISLSYPDSYLSQLLLFTVATFNEI
STLLIILTSYAFIIVTTLKMPSASGHRKVFSTCASHLTAITIFHGTILFLYCVPNSKNSRHTVKVASVFY
TVVIPLLNPLIYSLRNKDVKDAIRKIINTKYFHIKHRHWYPFNFVIEQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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