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Report for CCDS46062.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46062.1 Public Homo sapiens 19 ZNF793 24 110 108 CCDS HistoryNCBI Gene:390927Re-query CCDS DB by CCDS ID:46062.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46062.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000445217.5 ENSP00000396402.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000445217.5Link to Ensembl Protein Viewer:ENSP00000396402.1Re-query CCDS DB by Nucleotide ID:ENST00000445217Re-query CCDS DB by Protein ID:ENSP00000396402
Original member Current member EBI ENST00000587143.5 ENSP00000468605.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000587143.5Link to Ensembl Protein Viewer:ENSP00000468605.1Re-query CCDS DB by Nucleotide ID:ENST00000587143Re-query CCDS DB by Protein ID:ENSP00000468605
Original member Current member EBI ENST00000627814.3 ENSP00000487183.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000627814.3Link to Ensembl Protein Viewer:ENSP00000487183.2Re-query CCDS DB by Nucleotide ID:ENST00000627814Re-query CCDS DB by Protein ID:ENSP00000487183
Original member Current member NCBI NM_001013659.3 NP_001013681.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001013659.3Link to Protein Sequence:NP_001013681.2Re-query CCDS DB by Nucleotide ID:NM_001013659Re-query CCDS DB by Protein ID:NP_001013681Link to BLAST:NP_001013681.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013681.2 406 Q6ZN11-1 406 100% 0 0

Chromosomal Locations for CCDS 46062.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 37523440 37523454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37532356 37532482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37533308 37533403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37536897 37537879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1221 nt):
ATGATCGAATACCAGATACCTGTGTCATTCAAAGATGTGGTTGTGGGCTTCACCCAAGAGGAGTGGCACC
GGCTGAGTCCTGCTCAGAGGGCCCTGTACCGGGATGTGATGCTGGAAACCTATAGCAACCTCGTCTCAGT
GGGTTATGAAGGCACCAAACCAGATGTGATCCTCAGACTGGAGCAGGAAGAAGCACCATGGATTGGTGAG
GCAGCATGCCCGGGCTGCCACTGTTGGGAAGACATCTGGCGAGTTAATATCCAGAGGAAAAGACGGCAAG
ACATGCTTTTGAGGCCAGGCGCAGCCATAAGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGAATATAA
TAAGTTTGGGAAAATATCACTTCTGAGCACTGATCTTTTTTCTTCAATCCAGAGCCCTAGTAACTGGAAC
CCTTGTGGAAAGAATTTGAACCATAATTTAGACTTGATTGGTTTTAAGAGAAACTGTGCAAAAAAGCAAG
ATGAGTGTTATGCTTATGGGAAATTGCTTCAGCGTATAAATCATGGTAGACGACCTAATGGAGAAAAGCC
CCGGGGTTGCAGTCACTGTGAGAAAGCTTTCACCCAGAACCCGGCACTTATGTATAAACCAGCAGTAAGT
GATTCTCTCTTGTACAAACGGAAGAGGGTTCCACCTACAGAAAAACCCCACGTCTGTAGTGAGTGTGGGA
AAGCCTTCTGCTACAAGTCTGAATTCATTAGGCATCAGAGAAGTCACACTGGGGAGAAGCCTTATGGCTG
CACTGACTGTGGGAAAGCCTTTTCACATAAGTCAACCCTCATCAAACACCAGAGAATTCACACTGGGGTA
AGACCCTTTGAATGTTTTTTTTGTGGGAAAGCCTTTACCCAGAAGTCACACCGCACAGAACATCAGAGAA
CACACACAGGAGAGAGACCCTTTGTCTGCAGTGAATGCGGGAAATCGTTTGGTGAGAAGTCATACCTCAA
TGTACATCGAAAAATGCACACAGGAGAAAGACCGTATCGTTGCAGAGAATGTGGAAAATCCTTCAGCCAG
AAGTCATGCCTCAATAAACATTGGAGAACTCACACAGGAGAGAAGCCCTATGGGTGCAATGAATGTGGGA
AAGCTTTCTACCAGAAGCCAAACCTCAGCAGACATCAGAAAATTCATGCTCGGAAGAATGCCTACAGGAA
TGAAAACTTAATAATTGTGGGAAATACTTGA

Translation (406 aa):
MIEYQIPVSFKDVVVGFTQEEWHRLSPAQRALYRDVMLETYSNLVSVGYEGTKPDVILRLEQEEAPWIGE
AACPGCHCWEDIWRVNIQRKRRQDMLLRPGAAISKKTLPKEKSCEYNKFGKISLLSTDLFSSIQSPSNWN
PCGKNLNHNLDLIGFKRNCAKKQDECYAYGKLLQRINHGRRPNGEKPRGCSHCEKAFTQNPALMYKPAVS
DSLLYKRKRVPPTEKPHVCSECGKAFCYKSEFIRHQRSHTGEKPYGCTDCGKAFSHKSTLIKHQRIHTGV
RPFECFFCGKAFTQKSHRTEHQRTHTGERPFVCSECGKSFGEKSYLNVHRKMHTGERPYRCRECGKSFSQ
KSCLNKHWRTHTGEKPYGCNECGKAFYQKPNLSRHQKIHARKNAYRNENLIIVGNT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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