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Report for CCDS59046.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59046.1 Public Homo sapiens 7 ELFN1 24 110 108 CCDS HistoryNCBI Gene:392617Re-query CCDS DB by CCDS ID:59046.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59046.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000424383.5 ENSP00000456548.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000424383.5Link to Ensembl Protein Viewer:ENSP00000456548.1Re-query CCDS DB by Nucleotide ID:ENST00000424383Re-query CCDS DB by Protein ID:ENSP00000456548
Original member Current member EBI ENST00000561626.4 ENSP00000457193.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000561626.4Link to Ensembl Protein Viewer:ENSP00000457193.1Re-query CCDS DB by Nucleotide ID:ENST00000561626Re-query CCDS DB by Protein ID:ENSP00000457193
Original member Current member EBI ENST00000691883.1 ENSP00000510296.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000691883.1Link to Ensembl Protein Viewer:ENSP00000510296.1Re-query CCDS DB by Nucleotide ID:ENST00000691883Re-query CCDS DB by Protein ID:ENSP00000510296
Original member Current member NCBI NM_001128636.4 NP_001122108.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001128636.4Link to Protein Sequence:NP_001122108.1Re-query CCDS DB by Nucleotide ID:NM_001128636Re-query CCDS DB by Protein ID:NP_001122108Link to BLAST:NP_001122108.1
Original member Current member NCBI NM_001394187.1 NP_001381116.1 Accepted alive Link to Nucleotide Sequence:NM_001394187.1Link to Protein Sequence:NP_001381116.1Re-query CCDS DB by Nucleotide ID:NM_001394187Re-query CCDS DB by Protein ID:NP_001381116Link to BLAST:NP_001381116.1
Original member Current member NCBI NM_001394188.1 NP_001381117.1 Accepted alive Link to Nucleotide Sequence:NM_001394188.1Link to Protein Sequence:NP_001381117.1Re-query CCDS DB by Nucleotide ID:NM_001394188Re-query CCDS DB by Protein ID:NP_001381117Link to BLAST:NP_001381117.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001122108.1 828 P0C7U0 828 100% 0 0
NP_001381116.1 828 P0C7U0 828 100% 0 0
NP_001381117.1 828 P0C7U0 828 100% 0 0

Chromosomal Locations for CCDS 59046.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 1744597 1747083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2487 nt):
ATGGCCGGGCGTGGGTGGGGCGCGCTGTGGGTGTGCGTGGCGGCCGCCACCCTGCTGCACGCTGGCGGCC
TGGCCCGCGCAGACTGCTGGCTGATCGAGGGCGACAAGGGCTTCGTGTGGCTGGCCATCTGCAGCCAGAA
CCAACCCCCCTACGAGGCCATCCCACAGCAGATCAACAGCACCATCGTGGACCTGCGGCTCAACGAGAAC
CGTATCCGCAGCGTGCAGTACGCCTCGCTCAGCCGCTTTGGCAACCTCACGTACCTCAACCTCACCAAGA
ACGAGATCGGCTACATCGAGGACGGCGCCTTCTCGGGCCAGTTCAACCTGCAGGTGCTGCAGCTGGGCTA
CAACCGGCTGCGCAACCTCACGGAGGGCATGCTGCGCGGCCTGGGCAAGCTGGAGTACCTGTACCTGCAG
GCCAACCTCATCGAGGTGGTCATGGCCAGCAGCTTCTGGGAGTGTCCCAACATCGTCAACATCGACCTGT
CCATGAACCGCATCCAGCAGCTCAACAGCGGCACCTTCGCCGGCCTGGCCAAGCTGTCGGTGTGCGAGCT
CTACAGCAACCCCTTCTACTGCTCCTGCGAGCTGCTGGGCTTCCTGCGCTGGCTGGCCGCCTTCACCAAC
GCCACACAGACGTACGACCGCATGCAGTGCGAGTCGCCGCCCGTCTACTCCGGCTACTACCTCCTGGGCC
AGGGCCGCCGCGGCCACCGCAGCATCCTCAGCAAACTGCAGTCAGTCTGCACCGAGGACTCGTACGCGGC
TGAGGTGGTCGGGCCCCCACGTCCAGCATCCGGGCGCTCACAGCCGGGCCGCTCCCCGCCGCCCCCGCCT
CCGCCGGAGCCCAGTGACATGCCCTGTGCCGATGATGAGTGCTTCTCCGGGGACGGCACCACGCCACTGG
TGGCCCTGCCCACGCTGGCCACGCAGGCCGAGGCCCGCCCCCTCATCAAGGTCAAGCAGCTCACTCAGAA
CTCGGCCACCATCACCGTCCAGCTGCCCAGCCCGTTCCACCGGATGTACACCCTGGAGCATTTCAACAAC
AGCAAGGCCTCCACCGTGTCCAGGCTGACCAAGGCCCAGGAGGAGATCCGTCTGACCAACCTGTTCACGC
TCACCAACTACACCTACTGCGTGGTGTCCACCAGCGCCGGGCTGCGCCACAACCACACCTGCCTCACCAT
CTGCTTGCCCCGGCTGCCCAGCCCGCCTGGTCCGGTGCCCAGCCCCTCCACGGCCACCCACTACATCATG
ACCATCCTGGGCTGCCTCTTCGGCATGGTGCTGGTGCTGGGCGCCGTCTACTACTGCCTGCGCAGGCGGC
GGCGCCAGGAGGAGAAGCACAAGAAGGCCGCCTCGGCAGCCGCAGCTGGCAGCCTCAAGAAGACCATCAT
CGAGCTCAAGTACGGGCCAGAGCTGGAGGCGCCCGGCCTGGCCCCGCTGTCCCAGGGCCCGCTGCTGGGC
CCCGAGGCCGTGACGCGCATCCCTTACCTGCCTGCGGCCGGCGAGGTGGAGCAGTACAAGCTGGTGGAGA
GCGCGGACACCCCCAAGGCCAGCAAGGGCAGCTACATGGAGGTTCGAACCGGGGACCCTCCGGAACGCAG
GGACTGTGAGCTGGGCCGGCCGGGCCCCGACAGCCAGAGTTCGGTGGCCGAGATCTCCACCATCGCCAAG
GAGGTGGACAAGGTCAACCAGATCATCAACAACTGCATCGACGCGCTCAAGTCCGAGTCCACCTCCTTCC
AGGGCGTCAAGTCGGGGCCCGTGTCCGTCGCGGAGCCGCCGCTGGTGCTGCTGTCCGAGCCGCTGGCCGC
CAAGCACGGCTTCCTGGCGCCCGGGTACAAGGACGCCTTCGGCCACAGCCTGCAGCGGCACCACAGCGTG
GAGGCCGCCGGGCCCCCTCGTGCCAGCACCTCGTCCAGCGGCTCCGTGCGCAGCCCCCGCGCCTTCCGAG
CCGAGGCCGTCGGGGTGCACAAGGCCGCGGCCGCCGAGGCCAAGTACATCGAGAAGGGCTCCCCCGCGGC
CGACGCCATCCTCACTGTGACACCCGCGGCCGCCGTGCTGCGGGCCGAGGCCGAGAAGGGTCGCCAGTAC
GGCGAGCACCGGCACTCGTACCCCGGCTCCCACCCGGCCGAGCCACCTGCGCCCCCCGGGCCACCGCCGC
CGCCTCCGCACGAGGGCCTGGGGCGCAAGGCGTCCATCCTGGAGCCACTCACCCGGCCGCGGCCCCGCGA
CCTCGCCTACTCGCAGCTGTCCCCGCAGTACCACAGCCTGAGCTACTCCTCCAGCCCCGAGTACACCTGC
CGGGCCTCCCAGAGCATCTGGGAGCGCTTCAGACTGAGCCGCCGGCGGCACAAGGAGGAAGAGGAGTTCA
TGGCCGCGGGCCATGCCCTGCGCAAGAAGGTTCAGTTCGCCAAAGACGAGGATCTGCACGACATCCTGGA
CTACTGGAAGGGCGTGTCGGCCCAGCACAAGTCCTGA

Translation (828 aa):
MAGRGWGALWVCVAAATLLHAGGLARADCWLIEGDKGFVWLAICSQNQPPYEAIPQQINSTIVDLRLNEN
RIRSVQYASLSRFGNLTYLNLTKNEIGYIEDGAFSGQFNLQVLQLGYNRLRNLTEGMLRGLGKLEYLYLQ
ANLIEVVMASSFWECPNIVNIDLSMNRIQQLNSGTFAGLAKLSVCELYSNPFYCSCELLGFLRWLAAFTN
ATQTYDRMQCESPPVYSGYYLLGQGRRGHRSILSKLQSVCTEDSYAAEVVGPPRPASGRSQPGRSPPPPP
PPEPSDMPCADDECFSGDGTTPLVALPTLATQAEARPLIKVKQLTQNSATITVQLPSPFHRMYTLEHFNN
SKASTVSRLTKAQEEIRLTNLFTLTNYTYCVVSTSAGLRHNHTCLTICLPRLPSPPGPVPSPSTATHYIM
TILGCLFGMVLVLGAVYYCLRRRRRQEEKHKKAASAAAAGSLKKTIIELKYGPELEAPGLAPLSQGPLLG
PEAVTRIPYLPAAGEVEQYKLVESADTPKASKGSYMEVRTGDPPERRDCELGRPGPDSQSSVAEISTIAK
EVDKVNQIINNCIDALKSESTSFQGVKSGPVSVAEPPLVLLSEPLAAKHGFLAPGYKDAFGHSLQRHHSV
EAAGPPRASTSSSGSVRSPRAFRAEAVGVHKAAAAEAKYIEKGSPAADAILTVTPAAAVLRAEAEKGRQY
GEHRHSYPGSHPAEPPAPPGPPPPPPHEGLGRKASILEPLTRPRPRDLAYSQLSPQYHSLSYSSSPEYTC
RASQSIWERFRLSRRRHKEEEEFMAAGHALRKKVQFAKDEDLHDILDYWKGVSAQHKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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