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Report for CCDS31672.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31672.1 Public Homo sapiens 11 C11orf87 24 110 108 CCDS HistoryNCBI Gene:399947Re-query CCDS DB by CCDS ID:31672.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31672.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000327419.7 ENSP00000331581.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000327419.7Link to Ensembl Protein Viewer:ENSP00000331581.6Re-query CCDS DB by Nucleotide ID:ENST00000327419Re-query CCDS DB by Protein ID:ENSP00000331581
Original member Current member NCBI NM_207645.4 NP_997528.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207645.4Link to Protein Sequence:NP_997528.2Re-query CCDS DB by Nucleotide ID:NM_207645Re-query CCDS DB by Protein ID:NP_997528Link to BLAST:NP_997528.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997528.2 197 Q6NUJ2 197 100% 0 0

Chromosomal Locations for CCDS 31672.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 109423634 109424227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (594 nt):
ATGAGTGCCAGGGCGCCGAAGGAGCTGAGGCTGGCGTTGCCGCCGTGTCTCCTCAACCGGACCTTTGCTT
CCCCCAACGCCAGCGGCAGCGGCAACACGGGTGCCCGCGGCCCAGGCGCAGTAGGCAGCGGCACCTGCAT
CACGCAGGTGGGACAGCAGCTCTTCCAGTCCTTCTCCTCCACGCTGGTGCTGATTGTCCTGGTTACCCTC
ATCTTCTGCCTCATCGTGCTGTCCCTCTCCACTTTCCACATCCACAAGCGTAGGATGAAGAAGCGGAAGA
TGCAGAGGGCTCAGGAGGAATATGAGCGGGATCACTGCAGCGGCAGCCGCGGTGGCGGGGGGCTGCCCCG
ACCTGGCAGGCAGGCCCCAACCCACGCAAAGGAAACCCGGCTGGAGAGGCAGCCCCGGGACTCTCCCTTC
TGCGCCCCTTCCAACGCCTCGTCGTTGTCCTCTTCGTCCCCTGGCCTCCCGTGCCAGGGTCCCTGTGCTC
CTCCGCCTCCACCGCCAGCCTCCAGTCCCCAAGGAGCACACGCAGCTTCCTCCTGTTTGGACACAGCTGG
CGAGGGCCTTTTGCAAACGGTGGTACTGTCCTGA

Translation (197 aa):
MSARAPKELRLALPPCLLNRTFASPNASGSGNTGARGPGAVGSGTCITQVGQQLFQSFSSTLVLIVLVTL
IFCLIVLSLSTFHIHKRRMKKRKMQRAQEEYERDHCSGSRGGGGLPRPGRQAPTHAKETRLERQPRDSPF
CAPSNASSLSSSSPGLPCQGPCAPPPPPPASSPQGAHAASSCLDTAGEGLLQTVVLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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