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Report for CCDS7543.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7543.1 Public Homo sapiens 10 CNNM2 24 110 108 CCDS HistoryNCBI Gene:54805Re-query CCDS DB by CCDS ID:7543.1Re-query CCDS DB by GeneID:54805See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7543.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369875.3 ENSP00000358891.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369875.3Link to Ensembl Protein Viewer:ENSP00000358891.3Re-query CCDS DB by Nucleotide ID:ENST00000369875Re-query CCDS DB by Protein ID:ENSP00000358891
Original member Current member NCBI NM_199077.3 NP_951059.1 Accepted alive Link to Nucleotide Sequence:NM_199077.3Link to Protein Sequence:NP_951059.1Re-query CCDS DB by Nucleotide ID:NM_199077Re-query CCDS DB by Protein ID:NP_951059Link to BLAST:NP_951059.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_951059.1 552 Q9H8M5-3 552 100% 0 0

Chromosomal Locations for CCDS 7543.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 102918481 102920101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102927345 102927382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1659 nt):
ATGATTGGCTGTGGCGCTTGTGAACCCAAAGTAAAGATGGCGGGCGGGCAGGCAGCCGCCGCACTGCCCA
CTTGGAAGATGGCGGCGCGCCGCAGCCTCAGCGCTCGCGGCCGGGGGATCCTGCAGGCGGCTGCGGGGCG
GCTGCTGCCGCTGCTCCTGCTGAGCTGCTGCTGCGGTGCGGGCGGCTGCGCAGCGGTGGGCGAGAATGAG
GAGACGGTGATCATCGGGCTGCGACTGGAGGACACGAACGACGTGTCGTTCATGGAAGGGGGGGCGCTGC
GGGTGAGCGAACGGACCCGGGTCAAGCTGCGGGTGTACGGGCAGAACATCAATAACGAGACGTGGTCCCG
CATCGCCTTCACCGAGCACGAGCGGCGGCGCCACAGCCCGGGGGAGCGCGGGCTGGGGGGCCCCGCGCCG
CCAGAGCCGGACAGCGGCCCCCAGCGATGCGGCATCCGCACCTCAGACATCATCATCTTGCCCCACATCA
TTCTCAACCGCCGCACCTCGGGCATCATCGAGATCGAGATCAAACCGCTACGCAAGATGGAGAAGAGCAA
GTCCTATTACCTGTGCACGTCGCTCTCCACGCCCGCCCTGGGCGCCGGCGGCTCGGGGTCCACGGGTGGC
GCCGTCGGGGGCAAGGGTGGCTCGGGGGTGGCCGGGCTCCCGCCGCCCCCGTGGGCCGAGACCACCTGGA
TTTACCACGACGGCGAGGACACCAAGATGATCGTAGGCGAAGAGAAGAAGTTCCTGCTGCCCTTCTGGCT
GCAGGTGATCTTCATTTCGCTGCTGCTGTGCCTGTCGGGCATGTTCAGCGGCCTCAACCTGGGGCTCATG
GCCCTGGACCCGATGGAGCTGCGCATCGTGCAGAACTGCGGCACGGAGAAGGAGAAGAATTACGCCAAGC
GCATCGAGCCGGTGCGCAGGCAGGGCAACTACCTGCTGTGCTCACTGCTGCTGGGCAACGTGCTGGTCAA
CACCACGCTCACCATCCTGCTCGACGACATCGCCGGCTCGGGCCTCGTGGCCGTGGTAGTCTCCACCATC
GGTATCGTCATCTTCGGAGAGATCGTGCCCCAGGCCATCTGCTCCCGGCATGGCCTGGCTGTGGGGGCCA
ACACCATCTTCCTCACCAAGTTTTTCATGATGATGACCTTCCCCGCTTCCTACCCGGTCAGCAAGCTGCT
GGACTGCGTCCTGGGCCAGGAGATAGGCACCGTCTATAACCGGGAAAAACTGCTGGAGATGCTCCGGGTC
ACCGATCCCTACAACGACCTCGTTAAGGAGGAGCTGAACATCATCCAAGGGGCGCTGGAGCTCCGCACCA
AGACGGTGGAGGACGTGATGACCCCACTCCGGGACTGCTTCATGATCACCGGCGAAGCCATCCTGGACTT
CAACACCATGTCTGAGATCATGGAGAGCGGCTACACCCGCATTCCAGTGTTTGAAGGGGAGCGCTCCAAT
ATCGTGGACCTGCTGTTTGTCAAAGACTTGGCCTTCGTGGATCCCGATGACTGTACCCCCCTGAAAACCA
TCACCAAATTTTATAACCACCCCTTGCACTTTGTTTTCAATGACACCAAGTTGGACGCTATGCTGGAAGA
ATTTAAGAAAGAACACACAAACAAGAAACCCAAATCATACCAACACTGA

Translation (552 aa):
MIGCGACEPKVKMAGGQAAAALPTWKMAARRSLSARGRGILQAAAGRLLPLLLLSCCCGAGGCAAVGENE
ETVIIGLRLEDTNDVSFMEGGALRVSERTRVKLRVYGQNINNETWSRIAFTEHERRRHSPGERGLGGPAP
PEPDSGPQRCGIRTSDIIILPHIILNRRTSGIIEIEIKPLRKMEKSKSYYLCTSLSTPALGAGGSGSTGG
AVGGKGGSGVAGLPPPPWAETTWIYHDGEDTKMIVGEEKKFLLPFWLQVIFISLLLCLSGMFSGLNLGLM
ALDPMELRIVQNCGTEKEKNYAKRIEPVRRQGNYLLCSLLLGNVLVNTTLTILLDDIAGSGLVAVVVSTI
GIVIFGEIVPQAICSRHGLAVGANTIFLTKFFMMMTFPASYPVSKLLDCVLGQEIGTVYNREKLLEMLRV
TDPYNDLVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSN
IVDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLDAMLEEFKKEHTNKKPKSYQH


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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