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Report for CCDS44474.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44474.1 Public Homo sapiens 10 CNNM2 24 110 108 CCDS HistoryNCBI Gene:54805Re-query CCDS DB by CCDS ID:44474.1Re-query CCDS DB by GeneID:54805See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44474.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369878.9 ENSP00000358894.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369878.9Link to Ensembl Protein Viewer:ENSP00000358894.3Re-query CCDS DB by Nucleotide ID:ENST00000369878Re-query CCDS DB by Protein ID:ENSP00000358894
Original member Current member NCBI NM_017649.5 NP_060119.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017649.5Link to Protein Sequence:NP_060119.3Re-query CCDS DB by Nucleotide ID:NM_017649Re-query CCDS DB by Protein ID:NP_060119Link to BLAST:NP_060119.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060119.3 875 Q9H8M5-1 875 100% 0 0

Chromosomal Locations for CCDS 44474.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 102918481 102920101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103049707 103049850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103054329 103054466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103056795 103056964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103068629 103068722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103071774 103071839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103076086 103076270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103076971 103077180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2628 nt):
ATGATTGGCTGTGGCGCTTGTGAACCCAAAGTAAAGATGGCGGGCGGGCAGGCAGCCGCCGCACTGCCCA
CTTGGAAGATGGCGGCGCGCCGCAGCCTCAGCGCTCGCGGCCGGGGGATCCTGCAGGCGGCTGCGGGGCG
GCTGCTGCCGCTGCTCCTGCTGAGCTGCTGCTGCGGTGCGGGCGGCTGCGCAGCGGTGGGCGAGAATGAG
GAGACGGTGATCATCGGGCTGCGACTGGAGGACACGAACGACGTGTCGTTCATGGAAGGGGGGGCGCTGC
GGGTGAGCGAACGGACCCGGGTCAAGCTGCGGGTGTACGGGCAGAACATCAATAACGAGACGTGGTCCCG
CATCGCCTTCACCGAGCACGAGCGGCGGCGCCACAGCCCGGGGGAGCGCGGGCTGGGGGGCCCCGCGCCG
CCAGAGCCGGACAGCGGCCCCCAGCGATGCGGCATCCGCACCTCAGACATCATCATCTTGCCCCACATCA
TTCTCAACCGCCGCACCTCGGGCATCATCGAGATCGAGATCAAACCGCTACGCAAGATGGAGAAGAGCAA
GTCCTATTACCTGTGCACGTCGCTCTCCACGCCCGCCCTGGGCGCCGGCGGCTCGGGGTCCACGGGTGGC
GCCGTCGGGGGCAAGGGTGGCTCGGGGGTGGCCGGGCTCCCGCCGCCCCCGTGGGCCGAGACCACCTGGA
TTTACCACGACGGCGAGGACACCAAGATGATCGTAGGCGAAGAGAAGAAGTTCCTGCTGCCCTTCTGGCT
GCAGGTGATCTTCATTTCGCTGCTGCTGTGCCTGTCGGGCATGTTCAGCGGCCTCAACCTGGGGCTCATG
GCCCTGGACCCGATGGAGCTGCGCATCGTGCAGAACTGCGGCACGGAGAAGGAGAAGAATTACGCCAAGC
GCATCGAGCCGGTGCGCAGGCAGGGCAACTACCTGCTGTGCTCACTGCTGCTGGGCAACGTGCTGGTCAA
CACCACGCTCACCATCCTGCTCGACGACATCGCCGGCTCGGGCCTCGTGGCCGTGGTAGTCTCCACCATC
GGTATCGTCATCTTCGGAGAGATCGTGCCCCAGGCCATCTGCTCCCGGCATGGCCTGGCTGTGGGGGCCA
ACACCATCTTCCTCACCAAGTTTTTCATGATGATGACCTTCCCCGCTTCCTACCCGGTCAGCAAGCTGCT
GGACTGCGTCCTGGGCCAGGAGATAGGCACCGTCTATAACCGGGAAAAACTGCTGGAGATGCTCCGGGTC
ACCGATCCCTACAACGACCTCGTTAAGGAGGAGCTGAACATCATCCAAGGGGCGCTGGAGCTCCGCACCA
AGACGGTGGAGGACGTGATGACCCCACTCCGGGACTGCTTCATGATCACCGGCGAAGCCATCCTGGACTT
CAACACCATGTCTGAGATCATGGAGAGCGGCTACACCCGCATTCCAGTGTTTGAAGGGGAGCGCTCCAAT
ATCGTGGACCTGCTGTTTGTCAAAGACTTGGCCTTCGTGGATCCCGATGACTGTACCCCCCTGAAAACCA
TCACCAAATTTTATAACCACCCCTTGCACTTTGTTTTCAATGACACCAAGTTGGACGCTATGCTGGAAGA
ATTTAAGAAAGGTAAATCTCACCTGGCTATCGTGCAGCGGGTAAACAATGAGGGAGAAGGGGATCCATTT
TATGAAGTTCTGGGAATCGTCACCTTAGAAGATGTGATTGAAGAAATCATCAAATCTGAGATTCTTGATG
AAACAGATTTATACACTGACAACAGAACGAAAAAGAAAGTGGCTCACCGGGAACGAAAGCAAGATTTTTC
TGCCTTTAAGCAGACAGACAGTGAGATGAAGGTTAAAATATCACCACAGCTCCTCCTGGCCATGCACCGT
TTCCTAGCAACAGAAGTAGAAGCATTTAGCCCATCCCAGATGTCAGAGAAGATCCTTCTAAGGCTGCTAA
AGCACCCCAATGTCATCCAGGAACTGAAATATGATGAGAAGAACAAGAAAGCCCCCGAATACTACCTCTA
CCAGCGCAACAAGCCAGTAGACTACTTCGTTCTCATTCTGCAGGGGAAAGTGGAAGTTGAAGCTGGGAAA
GAAGGTATGAAGTTTGAAGCGAGCGCCTTCTCATACTATGGCGTGATGGCCCTGACAGCCTCTCCAGTTC
CTTTGTCCCTGTCTCGTACCTTTGTTGTCAGCAGAACAGAGTTGTTAGCAGCAGGTTCTCCAGGTGAAAA
TAAGTCCCCTCCTCGCCCATGTGGCTTGAATCACTCAGACTCTCTCAGTCGAAGCGACCGGATTGACGCC
GTCACACCAACACTGGGGAGCAGCAATAACCAGCTCAATTCTTCGCTCCTCCAAGTCTACATCCCCGATT
ACTCGGTGCGAGCCCTTTCGGATCTGCAGTTTGTTAAGATCTCAAGACAGCAATACCAAAATGCCTTGAT
GGCATCCCGGATGGACAAAACCCCCCAGTCTTCAGACAGTGAAAACACTAAAATCGAATTGACTCTTACG
GAGCTGCATGACGGGTTGCCAGACGAGACAGCCAACCTGCTCAACGAACAGAACTGTGTGACGCACAGTA
AGGCCAACCACAGCCTGCACAACGAAGGCGCCATCTAG

Translation (875 aa):
MIGCGACEPKVKMAGGQAAAALPTWKMAARRSLSARGRGILQAAAGRLLPLLLLSCCCGAGGCAAVGENE
ETVIIGLRLEDTNDVSFMEGGALRVSERTRVKLRVYGQNINNETWSRIAFTEHERRRHSPGERGLGGPAP
PEPDSGPQRCGIRTSDIIILPHIILNRRTSGIIEIEIKPLRKMEKSKSYYLCTSLSTPALGAGGSGSTGG
AVGGKGGSGVAGLPPPPWAETTWIYHDGEDTKMIVGEEKKFLLPFWLQVIFISLLLCLSGMFSGLNLGLM
ALDPMELRIVQNCGTEKEKNYAKRIEPVRRQGNYLLCSLLLGNVLVNTTLTILLDDIAGSGLVAVVVSTI
GIVIFGEIVPQAICSRHGLAVGANTIFLTKFFMMMTFPASYPVSKLLDCVLGQEIGTVYNREKLLEMLRV
TDPYNDLVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSN
IVDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIVQRVNNEGEGDPF
YEVLGIVTLEDVIEEIIKSEILDETDLYTDNRTKKKVAHRERKQDFSAFKQTDSEMKVKISPQLLLAMHR
FLATEVEAFSPSQMSEKILLRLLKHPNVIQELKYDEKNKKAPEYYLYQRNKPVDYFVLILQGKVEVEAGK
EGMKFEASAFSYYGVMALTASPVPLSLSRTFVVSRTELLAAGSPGENKSPPRPCGLNHSDSLSRSDRIDA
VTPTLGSSNNQLNSSLLQVYIPDYSVRALSDLQFVKISRQQYQNALMASRMDKTPQSSDSENTKIELTLT
ELHDGLPDETANLLNEQNCVTHSKANHSLHNEGAI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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