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Report for CCDS14931.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14931.1 Public Mus musculus 1 Mettl21e 23 108 98 CCDS HistoryNCBI Gene:403183Re-query CCDS DB by CCDS ID:14931.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 14931.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000054801.3 ENSMUSP00000056481.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000054801.3Link to Ensembl Protein Viewer:ENSMUSP00000056481.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000054801Re-query CCDS DB by Protein ID:ENSMUSP00000056481
Original member Current member NCBI NM_207281.3 NP_997164.1 Accepted alive Link to Nucleotide Sequence:NM_207281.3Link to Protein Sequence:NP_997164.1Re-query CCDS DB by Nucleotide ID:NM_207281Re-query CCDS DB by Protein ID:NP_997164Link to BLAST:NP_997164.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997164.1 244 Q8CDZ2 244 100% 0 0

Chromosomal Locations for CCDS 14931.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 44206350 44206753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44210164 44210281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44211032 44211198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44218111 44218156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (735 nt):
ATGGACCTCACAGTAACTCACATTACTCACAAAGAGACCTACAAAGAGCCCAGAGACGATGATGATGACA
AGCAGGTGGTCGCAGAGATCATGGCAAGAAGTTTTATCCCAACTCTGATAACGACTATTCCTTGGGAAGG
CTTTCACTTTGCTGGTCATGAGATTCAGATTACTGAAGGCAAAGATTGCTATGGTGCATTTGTCTGGCCA
TCGGCCCTTGTTCTATGCTATTTTCTGGAAACACATGCCAAGCAATATAACATGGTTGATAAAAATGTGA
TTGAAATTGGAGCTGGGACAGGGCTTGTCTCCATTGTGGCAAGCTTACTTGGTGCTCGTGTGATTGCTAC
AGACTTACCTGAATTACTTGGAAACCTGCAATATAATATTTCCAGAAACACCAAAATGAAATGCAAGCAT
CTGCCTCAGGTCAAAGAACTATCCTGGGGAGTAGCATTAGACAGGAATTTCCCCAGGTCTTCCAATAACT
TTGACTACATCCTGGCAGCAGATGTTGTCTATGCCCATCCGTTCCTGGAGGAGCTTCTCATGACCTTTGA
CCATCTCTGCAAAGAAACTACCATTATACTCTGGGCTATGAGATTCAGGCTGGAGAAAGAAAATAAATTT
GTAGATAAATTTAAGGAACTGTTTGACCTGGAAGAAATTTCTAGTTTCCCTAGCCTGAATATTAAGTTGT
ACAAAGCTATGAAGAAAAATCGGAGGAGTGCCTAG

Translation (244 aa):
MDLTVTHITHKETYKEPRDDDDDKQVVAEIMARSFIPTLITTIPWEGFHFAGHEIQITEGKDCYGAFVWP
SALVLCYFLETHAKQYNMVDKNVIEIGAGTGLVSIVASLLGARVIATDLPELLGNLQYNISRNTKMKCKH
LPQVKELSWGVALDRNFPRSSNNFDYILAADVVYAHPFLEELLMTFDHLCKETTIILWAMRFRLEKENKF
VDKFKELFDLEEISSFPSLNIKLYKAMKKNRRSA


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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