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Report for CCDS10118.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10118.2 Public Homo sapiens 15 DUOXA2 24 110 108 CCDS HistoryNCBI Gene:405753Re-query CCDS DB by CCDS ID:10118.2See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10118.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000323030.6 ENSP00000319705.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000323030.6Link to Ensembl Protein Viewer:ENSP00000319705.5Re-query CCDS DB by Nucleotide ID:ENST00000323030Re-query CCDS DB by Protein ID:ENSP00000319705
Original member Current member NCBI NM_207581.4 NP_997464.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207581.4Link to Protein Sequence:NP_997464.2Re-query CCDS DB by Nucleotide ID:NM_207581Re-query CCDS DB by Protein ID:NP_997464Link to BLAST:NP_997464.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997464.2 320 Q1HG44-1 320 100% 0 0

Chromosomal Locations for CCDS 10118.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 45114606 45114752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45115799 45115856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45116124 45116258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45116516 45116729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45117091 45117305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45117716 45117909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (963 nt):
ATGACCCTGTGGAACGGCGTACTGCCTTTTTACCCCCAGCCCCGGCATGCCGCAGGCTTCAGCGTTCCAC
TGCTCATCGTTATTCTAGTGTTTTTGGCTCTAGCAGCAAGCTTCCTGCTCATCTTGCCGGGGATCCGTGG
CCACTCGCGCTGGTTTTGGTTGGTGAGAGTTCTTCTCAGTCTGTTCATAGGCGCAGAAATTGTGGCTGTG
CACTTCAGTGCAGAATGGTTCGTGGGTACAGTGAACACCAACACATCCTACAAAGCCTTCAGCGCAGCGC
GCGTTACAGCCCGTGTCCGTCTGCTCGTGGGCCTGGAGGGCATTAATATTACACTCACAGGGACCCCAGT
GCATCAGCTGAACGAGACCATTGACTACAACGAGCAGTTCACCTGGCGTCTGAAAGAGAATTACGCCGCG
GAGTACGCGAACGCACTGGAGAAGGGGCTGCCGGACCCAGTGCTCTACCTGGCGGAGAAGTTCACACCGA
GTAGCCCTTGCGGCCTGTACCACCAGTACCACCTGGCGGGACACTACGCCTCGGCCACGCTATGGGTGGC
GTTCTGCTTCTGGCTCCTCTCCAACGTGCTGCTCTCCACGCCGGCCCCGCTCTACGGAGGCCTGGCACTG
CTGACCACCGGAGCCTTCGCGCTCTTCGGGGTCTTCGCCTTGGCCTCCATCTCTAGCGTGCCGCTCTGCC
CGCTCCGCCTAGGCTCCTCCGCGCTCACCACTCAGTACGGCGCCGCCTTCTGGGTCACGCTGGCAACCGG
CGTCCTGTGCCTCTTCCTCGGAGGGGCCGTGGTGAGTCTCCAGTATGTTCGGCCCAGCGCTCTTCGCACC
CTTCTGGACCAAAGCGCCAAGGACTGCAGCCAGGAGAGAGGGGGCTCACCTCTTATCCTCGGCGACCCAC
TGCACAAGCAGGCCGCTCTCCCAGACTTAAAATGTATCACCACTAACCTGTGA

Translation (320 aa):
MTLWNGVLPFYPQPRHAAGFSVPLLIVILVFLALAASFLLILPGIRGHSRWFWLVRVLLSLFIGAEIVAV
HFSAEWFVGTVNTNTSYKAFSAARVTARVRLLVGLEGINITLTGTPVHQLNETIDYNEQFTWRLKENYAA
EYANALEKGLPDPVLYLAEKFTPSSPCGLYHQYHLAGHYASATLWVAFCFWLLSNVLLSTPAPLYGGLAL
LTTGAFALFGVFALASISSVPLCPLRLGSSALTTQYGAAFWVTLATGVLCLFLGGAVVSLQYVRPSALRT
LLDQSAKDCSQERGGSPLILGDPLHKQAALPDLKCITTNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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