NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS732.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
732.1 Public Homo sapiens 1 ZNF644 24 110 108 CCDS HistoryNCBI Gene:84146Re-query CCDS DB by CCDS ID:732.1Re-query CCDS DB by GeneID:84146See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 732.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000347275.9 ENSP00000340828.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000347275.9Link to Ensembl Protein Viewer:ENSP00000340828.5Re-query CCDS DB by Nucleotide ID:ENST00000347275Re-query CCDS DB by Protein ID:ENSP00000340828
Original member Current member EBI ENST00000361321.5 ENSP00000354659.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361321.5Link to Ensembl Protein Viewer:ENSP00000354659.5Re-query CCDS DB by Nucleotide ID:ENST00000361321Re-query CCDS DB by Protein ID:ENSP00000354659
Original member Current member NCBI NM_016620.4 NP_057704.2 Accepted alive Link to Nucleotide Sequence:NM_016620.4Link to Protein Sequence:NP_057704.2Re-query CCDS DB by Nucleotide ID:NM_016620Re-query CCDS DB by Protein ID:NP_057704Link to BLAST:NP_057704.2
Original member Current member NCBI NM_032186.5 NP_115562.3 Accepted alive Link to Nucleotide Sequence:NM_032186.5Link to Protein Sequence:NP_115562.3Re-query CCDS DB by Nucleotide ID:NM_032186Re-query CCDS DB by Protein ID:NP_115562Link to BLAST:NP_115562.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057704.2 105 Q9H582-3 105 100% 0 0
NP_115562.3 105 Q9H582-3 105 100% 0 0

Chromosomal Locations for CCDS 732.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 90916798 90916990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90918052 90918154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 90982310 90982331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (318 nt):
ATGTTAATAAGACAAAATCTAGCCTTAGATTGTAAGCAAAAGAAATCAAGGTCAAGATCTGGAAGCAAGA
AGAAAATGCTAACATTACCTCATGGTGCTGACGAGGTTTACATTCTCCGATGCAGGTTTTGTGGCCTAGT
CTTTCGAGGACCCTTGTCTGTTCAGGAAGACTGGATTAAGCACTTACAACGACATATTGTAAACGCTAAT
CTTCCACGGACTGGAGCTGGCATGGTGGAAGTCACGTCACTACTTAAAAAGCCTGCCTCCATTACAGAAA
CTTCATTTTCTCTACTAATGGCCGAAGCAGCTTCATAG

Translation (105 aa):
MLIRQNLALDCKQKKSRSRSGSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIKHLQRHIVNAN
LPRTGAGMVEVTSLLKKPASITETSFSLLMAEAAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH