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Report for CCDS10918.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10918.1 Public Homo sapiens 16 CHST6 24 110 108 CCDS HistoryNCBI Gene:4166Re-query CCDS DB by CCDS ID:10918.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10918.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332272.9 ENSP00000328983.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000332272.9Link to Ensembl Protein Viewer:ENSP00000328983.4Re-query CCDS DB by Nucleotide ID:ENST00000332272Re-query CCDS DB by Protein ID:ENSP00000328983
Original member Current member EBI ENST00000390664.3 ENSP00000375079.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000390664.3Link to Ensembl Protein Viewer:ENSP00000375079.2Re-query CCDS DB by Nucleotide ID:ENST00000390664Re-query CCDS DB by Protein ID:ENSP00000375079
Original member Current member EBI ENST00000649824.1 ENSP00000496806.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649824.1Link to Ensembl Protein Viewer:ENSP00000496806.1Re-query CCDS DB by Nucleotide ID:ENST00000649824Re-query CCDS DB by Protein ID:ENSP00000496806
Original member Current member EBI ENST00000649341.1 ENSP00000497635.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649341.1Link to Ensembl Protein Viewer:ENSP00000497635.1Re-query CCDS DB by Nucleotide ID:ENST00000649341Re-query CCDS DB by Protein ID:ENSP00000497635
Original member Current member NCBI NM_021615.5 NP_067628.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021615.5Link to Protein Sequence:NP_067628.1Re-query CCDS DB by Nucleotide ID:NM_021615Re-query CCDS DB by Protein ID:NP_067628Link to BLAST:NP_067628.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067628.1 395 Q9GZX3 395 100% 0 0

Chromosomal Locations for CCDS 10918.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 75478641 75479828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1188 nt):
ATGTGGCTGCCGCGCGTCTCCAGCACAGCAGTGACCGCGCTCCTCCTGGCGCAGACCTTCCTCCTCCTCT
TTCTGGTTTCCCGGCCAGGGCCCTCGTCCCCAGCAGGCGGCGAGGCGCGCGTGCATGTGCTGGTGCTGTC
CTCGTGGCGCTCGGGCTCGTCCTTCGTGGGCCAACTCTTCAACCAGCACCCCGACGTCTTCTACCTAATG
GAGCCCGCGTGGCACGTGTGGACCACCCTGTCGCAGGGCAGCGCCGCAACGCTGCACATGGCTGTGCGCG
ACCTGGTGCGCTCCGTCTTCCTGTGCGACATGGACGTGTTTGATGCCTATCTGCCTTGGCGCCGCAACCT
GTCCGACCTCTTCCAGTGGGCCGTGAGCCGTGCACTGTGCTCGCCACCCGCCTGCAGTGCCTTTCCCCGA
GGCGCCATCAGCAGCGAGGCCGTGTGCAAGCCACTGTGCGCGCGGCAGTCCTTCACCCTGGCCCGGGAGG
CCTGCCGCTCCTACAGCCACGTGGTGCTCAAGGAGGTGCGCTTCTTCAACCTGCAGGTGCTCTACCCGCT
GCTCAGCGACCCCGCGCTCAACCTACGCATCGTGCACCTGGTGCGCGACCCGCGGGCCGTGCTGCGCTCC
CGGGAGCAGACAGCCAAGGCTCTGGCGCGTGACAACGGCATCGTGCTGGGCACCAACGGCACGTGGGTGG
AGGCCGACCCCGGCCTGCGCGTGGTGCGCGAGGTGTGCCGTAGCCACGTACGCATCGCCGAGGCCGCCAC
ACTCAAGCCGCCACCCTTTCTGCGCGGCCGCTACCGCCTGGTGCGCTTCGAGGACCTGGCGCGGGAGCCG
CTGGCAGAAATCCGTGCGCTCTACGCCTTCACTGGGCTCAGTCTCACGCCACAGCTCGAGGCCTGGATCC
ATAACATCACCCACGGATCTGGACCTGGTGCGCGCCGCGAAGCCTTCAAGACTTCGTCCAGGAATGCGCT
CAACGTCTCCCAGGCCTGGCGCCATGCGCTGCCCTTTGCCAAGATCCGCCGCGTGCAGGAACTGTGCGCT
GGTGCGCTGCAGCTGCTGGGCTACCGGCCTGTGTACTCTGAGGACGAGCAGCGCAACCTCGCCCTTGATC
TGGTGCTGCCACGAGGCCTGAACGGCTTCACTTGGGCATCATCCACCGCCTCGCACCCCCGAAATTAG

Translation (395 aa):
MWLPRVSSTAVTALLLAQTFLLLFLVSRPGPSSPAGGEARVHVLVLSSWRSGSSFVGQLFNQHPDVFYLM
EPAWHVWTTLSQGSAATLHMAVRDLVRSVFLCDMDVFDAYLPWRRNLSDLFQWAVSRALCSPPACSAFPR
GAISSEAVCKPLCARQSFTLAREACRSYSHVVLKEVRFFNLQVLYPLLSDPALNLRIVHLVRDPRAVLRS
REQTAKALARDNGIVLGTNGTWVEADPGLRVVREVCRSHVRIAEAATLKPPPFLRGRYRLVRFEDLAREP
LAEIRALYAFTGLSLTPQLEAWIHNITHGSGPGARREAFKTSSRNALNVSQAWRHALPFAKIRRVQELCA
GALQLLGYRPVYSEDEQRNLALDLVLPRGLNGFTWASSTASHPRN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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