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Report for CCDS32795.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32795.1 Public Homo sapiens 18 LDLRAD4 24 110 108 CCDS HistoryNCBI Gene:753Re-query CCDS DB by CCDS ID:32795.1Re-query CCDS DB by GeneID:753See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32795.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000587757.5 ENSP00000466178.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000587757.5Link to Ensembl Protein Viewer:ENSP00000466178.1Re-query CCDS DB by Nucleotide ID:ENST00000587757Re-query CCDS DB by Protein ID:ENSP00000466178
Original member Current member NCBI NM_001003674.3 NP_001003674.1 Accepted alive Link to Nucleotide Sequence:NM_001003674.3Link to Protein Sequence:NP_001003674.1Re-query CCDS DB by Nucleotide ID:NM_001003674Re-query CCDS DB by Protein ID:NP_001003674Link to BLAST:NP_001003674.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001003674.1 269 O15165-6 269 100% 0 0

Chromosomal Locations for CCDS 32795.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 13612705 13612774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 13621117 13621271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 13643359 13643412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 13645127 13645657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (810 nt):
ATGTCCAGTGACCACCTGAACAACAGCACACTGAAGGAGGCTCAGTTCAAAGACCTGTTCTTAAAAAAAG
CGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTGGTCACGGTGATGGTGGTGGTCATCGTCTG
CCTGCTGAACCACTACAAAGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAG
GACGGGCTGCCGCAGGAAGGGTGCCTGTGGCCTTCAGACAGCGCCGCACCGCGGCTGGGCGCCTCGGAGA
TCATGCATGCCCCGCGGTCCAGGGACAGGTTCACAGCGCCGTCCTTCATCCAGAGGGATCGCTTCAGCCG
CTTCCAGCCCACCTACCCCTATGTGCAGCACGAGATTGATCTTCCTCCCACCATCTCCCTGTCCGACGGT
GAAGAGCCACCTCCTTACCAGGGGCCCTGCACCCTGCAGCTCCGGGACCCTGAACAGCAGATGGAACTCA
ACCGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATATTTGACAGTGATTTAATAGACATTGCTATGTA
TAGCGGGGGTCCATGCCCACCCAGCAGCAACTCGGGCATCAGTGCAAGCACCTGCAGCAGTAACGGGAGG
ATGGAGGGGCCACCCCCCACATACAGCGAGGTGATGGGCCACCACCCAGGCGCCTCTTTCCTCCATCACC
AGCGCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTACC
CATCAAAGGCAAAGATAGGAAGCCTGGGAACCTGGTCTGA

Translation (269 aa):
MSSDHLNNSTLKEAQFKDLFLKKAELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRRE
DGLPQEGCLWPSDSAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDG
EEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGR
MEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKPGNLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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