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Report for CCDS71192.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71192.1 Public Mus musculus 2 Wfdc8 23 108 98 CCDS HistoryNCBI Gene:277343Re-query CCDS DB by CCDS ID:71192.1Re-query CCDS DB by GeneID:277343See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 71192.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000094351.10 ENSMUSP00000091911.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000094351.10Link to Ensembl Protein Viewer:ENSMUSP00000091911.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000094351Re-query CCDS DB by Protein ID:ENSMUSP00000091911
Original member NCBI NM_001276431.1 NP_001263360.1 Updated not alive Link to Nucleotide Sequence:NM_001276431.1Link to Protein Sequence:NP_001263360.1Re-query CCDS DB by Nucleotide ID:NM_001276431Re-query CCDS DB by Protein ID:NP_001263360
Current member NCBI NM_001276431.2 NP_001263360.1 Accepted alive Link to Nucleotide Sequence:NM_001276431.2Link to Protein Sequence:NP_001263360.1Re-query CCDS DB by Nucleotide ID:NM_001276431Re-query CCDS DB by Protein ID:NP_001263360Link to BLAST:NP_001263360.1

Chromosomal Locations for CCDS 71192.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 164596790 164596813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164597690 164597778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164599949 164600089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164603153 164603320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164605766 164605906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164608568 164608685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164608782 164608895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (795 nt):
ATGGCCAAGTGTGGGGTGCCACAGAGAGTCCCGGGTGACTGCTTCAGACCTGTCTCAACTCGCCACCCCA
GGCAGATCCCTTCTTGCTTCTCCATCTGTTTCCTCACCCATGAAGCGCAGTCCCTCCGCGCCCTTGCCCA
CTCCTGGTGGAGTGGAGCTCTGCTGCTGCTGCTGCTGTTTCTCTTCCTCTCCTTGGAGCAGACCTCAACA
TCATACAACGCCAAGATCAAACAAAAAGTGGGAGAGTGTCCTAGGCAGCGGTTGGAATGCAGAAACGAGA
GTTTGAGCTCCTGCAAAACGGACTTCAACTGTAAGGCGCATTTCAAGTGCTGCCAATTTGCCTGTGGGAG
GAAATGCATGGATCCCTATGAAGAGCCCTGCATGCTACCCTCAGACAAAGGAAACTGCCAGGACATTTTG
ACGCGCTGGTATTTTGACTCTCAGAAGCACCAGTGCAGAGCCTTTCTATACAGTGGATGCCGTGGGAATG
CGAACAACTTCCTCACCAAGACTGACTGTAGAAACGCTTGCATGTTTGTTGAGAAGAAAGGACAGTGCCC
GCTGTTCCCTTTCCAAATGCGAATGGAGTGCCCAGCCTCCTGTAAGAACGACATGGATTGCCCGGAGAAG
GAGAAATGCTGCGAGTCCAGGTGTGGCTTCATCTGTGCCCGAGTCTGGCTAGTTTCCTGCTTTCGGCCTG
GACAGCAACCAGGAAGAATTCTTTCCCTGATAGACAAGAGAGACCCTTTCATCTTTTCAGTCACCTTTGG
GGAGAGTGGATCACACGGCCTTTGA

Translation (264 aa):
MAKCGVPQRVPGDCFRPVSTRHPRQIPSCFSICFLTHEAQSLRALAHSWWSGALLLLLLFLFLSLEQTST
SYNAKIKQKVGECPRQRLECRNESLSSCKTDFNCKAHFKCCQFACGRKCMDPYEEPCMLPSDKGNCQDIL
TRWYFDSQKHQCRAFLYSGCRGNANNFLTKTDCRNACMFVEKKGQCPLFPFQMRMECPASCKNDMDCPEK
EKCCESRCGFICARVWLVSCFRPGQQPGRILSLIDKRDPFIFSVTFGESGSHGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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