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Report for CCDS6296.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6296.1 Public Homo sapiens 8 ATP6V1C1 24 110 108 CCDS HistoryNCBI Gene:528Re-query CCDS DB by CCDS ID:6296.1Re-query CCDS DB by GeneID:528See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6296.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395862.7 ENSP00000379203.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395862.7Link to Ensembl Protein Viewer:ENSP00000379203.3Re-query CCDS DB by Nucleotide ID:ENST00000395862Re-query CCDS DB by Protein ID:ENSP00000379203
Original member Current member EBI ENST00000518738.2 ENSP00000430282.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000518738.2Link to Ensembl Protein Viewer:ENSP00000430282.1Re-query CCDS DB by Nucleotide ID:ENST00000518738Re-query CCDS DB by Protein ID:ENSP00000430282
Original member Current member NCBI NM_001695.5 NP_001686.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001695.5Link to Protein Sequence:NP_001686.1Re-query CCDS DB by Nucleotide ID:NM_001695Re-query CCDS DB by Protein ID:NP_001686Link to BLAST:NP_001686.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001686.1 382 P21283 382 100% 0 0

Chromosomal Locations for CCDS 6296.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 103040837 103040968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103042340 103042407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103048870 103048955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103051050 103051144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103052731 103052822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103053884 103053982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103055868 103055936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103062955 103063047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103063135 103063228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103064714 103064811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103066321 103066447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103068652 103068747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1149 nt):
ATGACTGAGTTCTGGCTTATATCTGCTCCTGGGGAGAAAACCTGTCAGCAAACATGGGAGAAATTGCATG
CGGCAACTTCAAAGAACAATAATCTTGCTGTCACTTCCAAGTTCAATATTCCTGACTTAAAGGTTGGCAC
GTTGGATGTCTTGGTTGGCTTGTCAGATGAACTGGCTAAACTGGATGCATTTGTAGAAGGAGTGGTTAAG
AAAGTAGCTCAATACATGGCTGATGTATTGGAAGATAGCAAAGACAAAGTTCAAGAGAATCTGTTGGCTA
ATGGAGTGGACTTGGTTACTTATATAACAAGGTTCCAGTGGGACATGGCCAAATATCCAATCAAGCAGTC
CCTGAAAAATATTTCTGAAATAATTGCCAAGGGAGTAACTCAGATTGATAATGACCTGAAATCTCGAGCA
TCTGCATACAATAACCTGAAAGGAAATCTTCAGAATTTGGAACGAAAGAATGCAGGAAGTTTGCTAACTA
GAAGTCTAGCAGAAATTGTGAAGAAGGATGACTTTGTTCTTGATTCAGAGTATCTCGTCACATTACTGGT
AGTAGTTCCCAAGTTAAACCACAACGACTGGATTAAGCAGTATGAAACACTAGCCGAAATGGTAGTTCCA
AGGTCTAGCAATGTTCTTTCAGAGGACCAAGACAGTTACCTGTGTAATGTCACCTTGTTTAGGAAGGCAG
TTGATGACTTCAGACACAAAGCCAGAGAAAACAAATTCATTGTTCGTGACTTCCAGTATAATGAAGAGGA
GATGAAAGCAGATAAAGAAGAAATGAACAGGCTTTCTACTGATAAGAAAAAACAATTTGGACCACTTGTA
CGGTGGCTGAAAGTGAATTTTAGTGAAGCATTTATTGCATGGATTCACGTGAAAGCATTACGGGTTTTCG
TTGAGTCTGTTTTAAGGTATGGCTTGCCAGTGAACTTCCAAGCAATGCTACTTCAGCCCAATAAGAAAAC
TTTGAAGAAACTGAGAGAAGTATTACATGAATTGTATAAACATCTAGACAGCAGTGCAGCAGCTATTATT
GATGCTCCTATGGATATTCCAGGTTTAAACCTGAGTCAACAAGAATACTACCCCTATGTGTACTACAAGA
TTGATTGCAACTTGCTGGAATTCAAGTGA

Translation (382 aa):
MTEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVK
KVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRA
SAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVP
RSSNVLSEDQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLV
RWLKVNFSEAFIAWIHVKALRVFVESVLRYGLPVNFQAMLLQPNKKTLKKLREVLHELYKHLDSSAAAII
DAPMDIPGLNLSQQEYYPYVYYKIDCNLLEFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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