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Report for CCDS2738.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2738.1 Public Homo sapiens 3 CCR3 24 110 108 CCDS HistoryNCBI Gene:1232Re-query CCDS DB by CCDS ID:2738.1Re-query CCDS DB by GeneID:1232See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2738.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357422.2 ENSP00000350003.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000357422.2Link to Ensembl Protein Viewer:ENSP00000350003.2Re-query CCDS DB by Nucleotide ID:ENST00000357422Re-query CCDS DB by Protein ID:ENSP00000350003
Original member Current member EBI ENST00000395940.3 ENSP00000379271.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395940.3Link to Ensembl Protein Viewer:ENSP00000379271.2Re-query CCDS DB by Nucleotide ID:ENST00000395940Re-query CCDS DB by Protein ID:ENSP00000379271
Original member Current member EBI ENST00000395942.2 ENSP00000379273.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395942.2Link to Ensembl Protein Viewer:ENSP00000379273.2Re-query CCDS DB by Nucleotide ID:ENST00000395942Re-query CCDS DB by Protein ID:ENSP00000379273
Original member Current member NCBI NM_001837.4 NP_001828.1 Accepted alive Link to Nucleotide Sequence:NM_001837.4Link to Protein Sequence:NP_001828.1Re-query CCDS DB by Nucleotide ID:NM_001837Re-query CCDS DB by Protein ID:NP_001828Link to BLAST:NP_001828.1
Original member Current member NCBI NM_178329.3 NP_847899.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178329.3Link to Protein Sequence:NP_847899.1Re-query CCDS DB by Nucleotide ID:NM_178329Re-query CCDS DB by Protein ID:NP_847899Link to BLAST:NP_847899.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001828.1 355 P51677-1 355 100% 0 0
NP_847899.1 355 P51677-1 355 100% 0 0

Chromosomal Locations for CCDS 2738.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 46265159 46266226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1068 nt):
ATGACAACCTCACTAGATACAGTTGAGACCTTTGGTACCACATCCTACTATGATGACGTGGGCCTGCTCT
GTGAAAAAGCTGATACCAGAGCACTGATGGCCCAGTTTGTGCCCCCGCTGTACTCCCTGGTGTTCACTGT
GGGCCTCTTGGGCAATGTGGTGGTGGTGATGATCCTCATAAAATACAGGAGGCTCCGAATTATGACCAAC
ATCTACCTGCTCAACCTGGCCATTTCGGACCTGCTCTTCCTCGTCACCCTTCCATTCTGGATCCACTATG
TCAGGGGGCATAACTGGGTTTTTGGCCATGGCATGTGTAAGCTCCTCTCAGGGTTTTATCACACAGGCTT
GTACAGCGAGATCTTTTTCATAATCCTGCTGACAATCGACAGGTACCTGGCCATTGTCCATGCTGTGTTT
GCCCTTCGAGCCCGGACTGTCACTTTTGGTGTCATCACCAGCATCGTCACCTGGGGCCTGGCAGTGCTAG
CAGCTCTTCCTGAATTTATCTTCTATGAGACTGAAGAGTTGTTTGAAGAGACTCTTTGCAGTGCTCTTTA
CCCAGAGGATACAGTATATAGCTGGAGGCATTTCCACACTCTGAGAATGACCATCTTCTGTCTCGTTCTC
CCTCTGCTCGTTATGGCCATCTGCTACACAGGAATCATCAAAACGCTGCTGAGGTGCCCCAGTAAAAAAA
AGTACAAGGCCATCCGGCTCATTTTTGTCATCATGGCGGTGTTTTTCATTTTCTGGACACCCTACAATGT
GGCTATCCTTCTCTCTTCCTATCAATCCATCTTATTTGGAAATGACTGTGAGCGGAGCAAGCATCTGGAC
CTGGTCATGCTGGTGACAGAGGTGATCGCCTACTCCCACTGCTGCATGAACCCGGTGATCTACGCCTTTG
TTGGAGAGAGGTTCCGGAAGTACCTGCGCCACTTCTTCCACAGGCACTTGCTCATGCACCTGGGCAGATA
CATCCCATTCCTTCCTAGTGAGAAGCTGGAAAGAACCAGCTCTGTCTCTCCATCCACAGCAGAGCCGGAA
CTCTCTATTGTGTTTTAG

Translation (355 aa):
MTTSLDTVETFGTTSYYDDVGLLCEKADTRALMAQFVPPLYSLVFTVGLLGNVVVVMILIKYRRLRIMTN
IYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMCKLLSGFYHTGLYSEIFFIILLTIDRYLAIVHAVF
ALRARTVTFGVITSIVTWGLAVLAALPEFIFYETEELFEETLCSALYPEDTVYSWRHFHTLRMTIFCLVL
PLLVMAICYTGIIKTLLRCPSKKKYKAIRLIFVIMAVFFIFWTPYNVAILLSSYQSILFGNDCERSKHLD
LVMLVTEVIAYSHCCMNPVIYAFVGERFRKYLRHFFHRHLLMHLGRYIPFLPSEKLERTSSVSPSTAEPE
LSIVF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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