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Report for CCDS7486.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7486.1 Public Homo sapiens 10 CPN1 24 110 108 CCDS HistoryNCBI Gene:1369Re-query CCDS DB by CCDS ID:7486.1Re-query CCDS DB by GeneID:1369See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7486.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370418.8 ENSP00000359446.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370418.8Link to Ensembl Protein Viewer:ENSP00000359446.3Re-query CCDS DB by Nucleotide ID:ENST00000370418Re-query CCDS DB by Protein ID:ENSP00000359446
Original member Current member NCBI NM_001308.3 NP_001299.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001308.3Link to Protein Sequence:NP_001299.1Re-query CCDS DB by Nucleotide ID:NM_001308Re-query CCDS DB by Protein ID:NP_001299Link to BLAST:NP_001299.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001299.1 458 P15169 458 100% 0 0

Chromosomal Locations for CCDS 7486.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 100042427 100042573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100048758 100048876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100054347 100054446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100057013 100057152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100063614 100063725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100065188 100065370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100069714 100069869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100075911 100076107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100081403 100081625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1377 nt):
ATGTCAGACCTGCTCTCAGTCTTCCTCCACCTCCTCCTTCTCTTCAAGTTGGTTGCCCCGGTGACCTTTC
GCCACCACCGCTATGATGATCTTGTGCGGACGCTGTACAAGGTGCAAAACGAATGCCCCGGCATCACGCG
GGTCTACAGCATTGGGCGCAGCGTGGAGGGGAGACACCTCTACGTGCTGGAGTTCAGCGACCACCCTGGA
ATCCACGAGCCCTTGGAACCAGAGGTCAAGTATGTGGGGAACATGCACGGCAACGAAGCGTTGGGCCGCG
AGCTGATGCTGCAGCTGTCGGAGTTTCTGTGCGAGGAGTTCCGGAACAGGAACCAGCGCATCGTCCAGCT
CATCCAGGACACGCGCATTCACATCCTGCCATCCATGAACCCCGACGGCTACGAGGTGGCTGCTGCCCAG
GGCCCAAACAAGCCTGGGTATCTAGTTGGCAGGAACAATGCAAATGGAGTGGACCTGAACCGCAACTTCC
CTGATCTCAATACCTATATCTACTATAACGAGAAGTACGGAGGCCCCAACCACCACCTGCCCCTTCCAGA
CAACTGGAAAAGTCAGGTGGAACCCGAGACCCGGGCGGTGATCCGGTGGATGCACTCCTTCAACTTTGTT
CTTTCAGCCAATCTCCACGGAGGGGCGGTGGTGGCCAATTACCCGTATGACAAGTCCTTTGAGCACCGGG
TCCGAGGGGTCCGCCGCACCGCCAGCACCCCCACGCCTGACGACAAGCTCTTCCAGAAGCTGGCCAAGGT
CTACTCCTATGCACATGGATGGATGTTCCAAGGTTGGAACTGCGGAGATTACTTCCCAGATGGCATCACC
AATGGGGCTTCCTGGTATTCTCTCAGCAAGGGAATGCAAGACTTTAATTATCTCCATACCAACTGCTTTG
AGATCACGCTGGAACTGAGTTGCGACAAGTTTCCCCCCGAAGAGGAGTTACAGCGGGAGTGGCTGGGTAA
TCGGGAAGCCCTAATCCAGTTCCTGGAACAGGTTCACCAGGGCATCAAGGGAATGGTGCTTGATGAGAAT
TACAATAATCTCGCCAATGCTGTCATTTCTGTCAGTGGGATTAACCATGATGTCACTTCAGGTGACCATG
GTGATTACTTCCGGCTGCTGCTTCCAGGTATCTACACTGTTAGTGCCACAGCACCTGGGTATGACCCAGA
GACAGTAACTGTGACCGTGGGTCCTGCGGAACCAACGTTGGTTAACTTCCACCTCAAAAGAAGCATCCCT
CAAGTAAGCCCTGTGAGGAGAGCTCCCAGCAGAAGGCACGGAGTCAGAGCCAAAGTGCAGCCCCAAGCCA
GAAAGAAAGAAATGGAGATGAGGCAGCTGCAGAGAGGCCCTGCCTGA

Translation (458 aa):
MSDLLSVFLHLLLLFKLVAPVTFRHHRYDDLVRTLYKVQNECPGITRVYSIGRSVEGRHLYVLEFSDHPG
IHEPLEPEVKYVGNMHGNEALGRELMLQLSEFLCEEFRNRNQRIVQLIQDTRIHILPSMNPDGYEVAAAQ
GPNKPGYLVGRNNANGVDLNRNFPDLNTYIYYNEKYGGPNHHLPLPDNWKSQVEPETRAVIRWMHSFNFV
LSANLHGGAVVANYPYDKSFEHRVRGVRRTASTPTPDDKLFQKLAKVYSYAHGWMFQGWNCGDYFPDGIT
NGASWYSLSKGMQDFNYLHTNCFEITLELSCDKFPPEEELQREWLGNREALIQFLEQVHQGIKGMVLDEN
YNNLANAVISVSGINHDVTSGDHGDYFRLLLPGIYTVSATAPGYDPETVTVTVGPAEPTLVNFHLKRSIP
QVSPVRRAPSRRHGVRAKVQPQARKKEMEMRQLQRGPA


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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