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Report for CCDS12152.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12152.1 Public Homo sapiens 19 FUT6 24 110 108 CCDS HistoryNCBI Gene:2528Re-query CCDS DB by CCDS ID:12152.1Re-query CCDS DB by GeneID:2528See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12152.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000286955.5 ENSP00000286955.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000286955.5Link to Ensembl Protein Viewer:ENSP00000286955.5Re-query CCDS DB by Nucleotide ID:ENST00000286955Re-query CCDS DB by Protein ID:ENSP00000286955
Original member Current member EBI ENST00000318336.10 ENSP00000313398.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000318336.10Link to Ensembl Protein Viewer:ENSP00000313398.4Re-query CCDS DB by Nucleotide ID:ENST00000318336Re-query CCDS DB by Protein ID:ENSP00000313398
Original member Current member EBI ENST00000524754.1 ENSP00000431708.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000524754.1Link to Ensembl Protein Viewer:ENSP00000431708.1Re-query CCDS DB by Nucleotide ID:ENST00000524754Re-query CCDS DB by Protein ID:ENSP00000431708
Original member Current member EBI ENST00000527106.5 ENSP00000432954.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000527106.5Link to Ensembl Protein Viewer:ENSP00000432954.1Re-query CCDS DB by Nucleotide ID:ENST00000527106Re-query CCDS DB by Protein ID:ENSP00000432954
Original member Current member NCBI NM_000150.4 NP_000141.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000150.4Link to Protein Sequence:NP_000141.1Re-query CCDS DB by Nucleotide ID:NM_000150Re-query CCDS DB by Protein ID:NP_000141Link to BLAST:NP_000141.1
Original member Current member NCBI NM_001040701.2 NP_001035791.1 Accepted alive Link to Nucleotide Sequence:NM_001040701.2Link to Protein Sequence:NP_001035791.1Re-query CCDS DB by Nucleotide ID:NM_001040701Re-query CCDS DB by Protein ID:NP_001035791Link to BLAST:NP_001035791.1
Original member Current member NCBI NM_001369502.1 NP_001356431.1 Accepted alive Link to Nucleotide Sequence:NM_001369502.1Link to Protein Sequence:NP_001356431.1Re-query CCDS DB by Nucleotide ID:NM_001369502Re-query CCDS DB by Protein ID:NP_001356431Link to BLAST:NP_001356431.1
Original member Current member NCBI NM_001369504.1 NP_001356433.1 Accepted alive Link to Nucleotide Sequence:NM_001369504.1Link to Protein Sequence:NP_001356433.1Re-query CCDS DB by Nucleotide ID:NM_001369504Re-query CCDS DB by Protein ID:NP_001356433Link to BLAST:NP_001356433.1
Original member Current member NCBI NM_001369505.1 NP_001356434.1 Accepted alive Link to Nucleotide Sequence:NM_001369505.1Link to Protein Sequence:NP_001356434.1Re-query CCDS DB by Nucleotide ID:NM_001369505Re-query CCDS DB by Protein ID:NP_001356434Link to BLAST:NP_001356434.1
Original member Current member NCBI NM_001381955.1 NP_001368884.1 Accepted alive Link to Nucleotide Sequence:NM_001381955.1Link to Protein Sequence:NP_001368884.1Re-query CCDS DB by Nucleotide ID:NM_001381955Re-query CCDS DB by Protein ID:NP_001368884Link to BLAST:NP_001368884.1
Original member Current member NCBI NM_001381956.1 NP_001368885.1 Accepted alive Link to Nucleotide Sequence:NM_001381956.1Link to Protein Sequence:NP_001368885.1Re-query CCDS DB by Nucleotide ID:NM_001381956Re-query CCDS DB by Protein ID:NP_001368885Link to BLAST:NP_001368885.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000141.1 359 P51993-1 359 100% 0 0
NP_001035791.1 359 P51993-1 359 100% 0 0
NP_001356431.1 359 P51993-1 359 100% 0 0
NP_001356433.1 359 P51993-1 359 100% 0 0
NP_001356434.1 359 P51993-1 359 100% 0 0
NP_001368884.1 359 P51993-1 359 100% 0 0
NP_001368885.1 359 P51993-1 359 100% 0 0

Chromosomal Locations for CCDS 12152.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 5831488 5832567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1080 nt):
ATGGATCCCCTGGGCCCGGCCAAGCCACAGTGGTCGTGGCGCTGCTGTCTGACCACGCTGCTGTTTCAGC
TGCTGATGGCTGTGTGTTTCTTCTCCTATCTGCGTGTGTCTCAAGACGATCCCACTGTGTACCCTAATGG
GTCCCGCTTCCCAGACAGCACAGGGACCCCCGCCCACTCCATCCCCCTGATCCTGCTGTGGACGTGGCCT
TTTAACAAACCCATAGCTCTGCCCCGCTGCTCAGAGATGGTGCCTGGCACGGCTGACTGCAACATCACTG
CCGACCGCAAGGTGTATCCACAGGCAGACGCGGTCATCGTGCACCACCGAGAGGTCATGTACAACCCCAG
TGCCCAGCTCCCACGCTCCCCGAGGCGGCAGGGGCAGCGATGGATCTGGTTCAGCATGGAGTCCCCAAGC
CACTGCTGGCAGCTGAAAGCCATGGACGGATACTTCAATCTCACCATGTCCTACCGCAGCGACTCCGACA
TCTTCACGCCCTACGGCTGGCTGGAGCCGTGGTCCGGCCAGCCTGCCCACCCACCGCTCAACCTCTCGGC
CAAGACCGAGCTGGTGGCCTGGGCAGTGTCCAACTGGGGGCCAAACTCCGCCAGGGTGCGCTACTACCAG
AGCCTGCAGGCCCATCTCAAGGTGGACGTGTACGGACGCTCCCACAAGCCCCTGCCCCAGGGAACCATGA
TGGAGACGCTGTCCCGGTACAAGTTCTATCTGGCCTTCGAGAACTCCTTGCACCCCGACTACATCACCGA
GAAGCTGTGGAGGAACGCCCTGGAGGCCTGGGCCGTGCCCGTGGTGCTGGGCCCCAGCAGAAGCAACTAC
GAGAGGTTCCTGCCACCCGACGCCTTCATCCACGTGGACGACTTCCAGAGCCCCAAGGACCTGGCCCGGT
ACCTGCAGGAGCTGGACAAGGACCACGCCCGCTACCTGAGCTACTTTCGCTGGCGGGAGACGCTGCGGCC
TCGCTCCTTCAGCTGGGCACTCGCTTTCTGCAAGGCCTGCTGGAAACTGCAGGAGGAATCCAGGTACCAG
ACACGCGGCATAGCGGCTTGGTTCACCTGA

Translation (359 aa):
MDPLGPAKPQWSWRCCLTTLLFQLLMAVCFFSYLRVSQDDPTVYPNGSRFPDSTGTPAHSIPLILLWTWP
FNKPIALPRCSEMVPGTADCNITADRKVYPQADAVIVHHREVMYNPSAQLPRSPRRQGQRWIWFSMESPS
HCWQLKAMDGYFNLTMSYRSDSDIFTPYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWGPNSARVRYYQ
SLQAHLKVDVYGRSHKPLPQGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNY
ERFLPPDAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALAFCKACWKLQEESRYQ
TRGIAAWFT


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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