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Report for CCDS12804.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12804.1 Public Homo sapiens 19 KLK1 24 110 108 CCDS HistoryNCBI Gene:3816Re-query CCDS DB by CCDS ID:12804.1Re-query CCDS DB by GeneID:3816See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12804.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301420.3 ENSP00000301420.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000301420.3Link to Ensembl Protein Viewer:ENSP00000301420.1Re-query CCDS DB by Nucleotide ID:ENST00000301420Re-query CCDS DB by Protein ID:ENSP00000301420
Original member Current member NCBI NM_002257.4 NP_002248.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002257.4Link to Protein Sequence:NP_002248.1Re-query CCDS DB by Nucleotide ID:NM_002257Re-query CCDS DB by Protein ID:NP_002248Link to BLAST:NP_002248.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002248.1 262 P06870-1 262 100% 0 0

Chromosomal Locations for CCDS 12804.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 50819194 50819349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50819899 50820035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50820154 50820443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50821712 50821871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50823703 50823748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (789 nt):
ATGTGGTTCCTGGTTCTGTGCCTCGCCCTGTCCCTGGGGGGGACTGGTGCTGCGCCCCCGATTCAGTCCC
GGATTGTGGGAGGCTGGGAGTGTGAGCAGCATTCCCAGCCCTGGCAGGCGGCTCTGTACCATTTCAGCAC
TTTCCAGTGTGGGGGCATCCTGGTGCACCGCCAGTGGGTGCTCACAGCTGCTCATTGCATCAGCGACAAT
TACCAGCTCTGGCTGGGTCGCCACAACTTGTTTGACGACGAAAACACAGCCCAGTTTGTTCATGTCAGTG
AGAGCTTCCCACACCCTGGCTTCAACATGAGCCTCCTGGAGAACCACACCCGCCAAGCAGACGAGGACTA
CAGCCACGACCTCATGCTGCTCCGCCTGACAGAGCCTGCTGATACCATCACAGATGCTGTGAAGGTCGTG
GAGTTGCCCACCGAGGAACCCGAAGTGGGGAGCACCTGTTTGGCTTCCGGCTGGGGCAGCATCGAACCAG
AGAATTTCTCATTTCCAGATGATCTCCAGTGTGTGGACCTCAAAATCCTGCCTAATGATGAGTGCAAAAA
AGCCCACGTCCAGAAGGTGACAGACTTCATGCTGTGTGTCGGACACCTGGAAGGTGGCAAAGACACCTGT
GTGGGTGATTCAGGGGGCCCGCTGATGTGTGATGGTGTGCTCCAAGGTGTCACATCATGGGGCTACGTCC
CTTGTGGCACCCCCAATAAGCCTTCTGTCGCCGTCAGAGTGCTGTCTTATGTGAAGTGGATCGAGGACAC
CATAGCGGAGAACTCCTGA

Translation (262 aa):
MWFLVLCLALSLGGTGAAPPIQSRIVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCISDN
YQLWLGRHNLFDDENTAQFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLLRLTEPADTITDAVKVV
ELPTEEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDECKKAHVQKVTDFMLCVGHLEGGKDTC
VGDSGGPLMCDGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTIAENS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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