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Report for CCDS34594.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34594.1 Public Homo sapiens 7 RNF216 24 110 108 CCDS HistoryNCBI Gene:54476Re-query CCDS DB by CCDS ID:34594.1Re-query CCDS DB by GeneID:54476See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34594.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000389902.8 ENSP00000374552.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000389902.8Link to Ensembl Protein Viewer:ENSP00000374552.3Re-query CCDS DB by Nucleotide ID:ENST00000389902Re-query CCDS DB by Protein ID:ENSP00000374552
Original member Current member NCBI NM_207111.4 NP_996994.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207111.4Link to Protein Sequence:NP_996994.1Re-query CCDS DB by Nucleotide ID:NM_207111Re-query CCDS DB by Protein ID:NP_996994Link to BLAST:NP_996994.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_996994.1 923 Q9NWF9-1 923 100% 0 0

Chromosomal Locations for CCDS 34594.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 5622860 5623179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5624056 5624125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5641154 5641376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5652413 5652510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5711761 5711839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5712715 5712863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5715053 5715190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5716716 5716766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5721033 5721172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5725324 5725438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5729432 5729596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5730715 5730817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5739276 5739352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5740973 5741815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5752846 5752979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5761003 5761069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2772 nt):
ATGGAAGAGGGAAACAACAATGAAGAGGTAATTCACTTGAACAACTTTCACTGCCATCGGGGACAAGAGT
GGATCAATCTCCGAGATGGGCCCATCACCATATCTGACTCCTCAGATGAGGAAAGGATTCCAATGCTGGT
CACCCCAGCTCCTCAGCAGCATGAAGAAGAGGACCTGGATGATGATGTCATCCTGACAGAAACAAATAAA
CCTCAGAGATCACGACCCAATCTCATCAAACCAGCTGCCCAGTGGCAAGATCTGAAAAGGTTGGGAGAAG
AAAGGCCTAAAAAGTCTAGAGCAGCATTTGAATCAGATAAGAGCAGCTATTTTTCAGTGTGTAACAACCC
ATTGTTTGATTCTGGGGCACAGGATGATTCTGAGGATGACTACGGTGAATTTCTGGATCTTGGGCCTCCT
GGAATCTCTGAATTCACTAAGCCAAGTGGCCAAACAGAAAGAGAACCCAAGCCTGGACCGAGTCATAACC
AAGCAGCAAATGACATTGTCAACCCCAGATCAGAGCAGAAAGTCATCATCTTGGAAGAAGGTAGCCTTCT
TTACACAGAAAGCGATCCTTTGGAAACTCAGAACCAGTCATCCGAAGACTCAGAGACAGAGCTGTTATCA
AATCTAGGAGAGTCAGCTGCTCTAGCAGATGATCAGGCCATCGAAGAAGACTGCTGGTTAGATCATCCTT
ACTTCCAGTCTCTGAACCAACAGCCCCGTGAAATAACAAACCAGGTCGTTCCTCAGGAACGGCAGCCTGA
AGCAGAACTGGGCCGCTTGTTGTTTCAGCATGAATTCCCAGGGCCCGCTTTTCCAAGGCCGGAACCCCAG
CAAGGTGGGATTTCAGGCCCCTCTTCTCCTCAGCCTGCCCATCCTCTAGGAGAGTTTGAAGACCAGCAGT
TAGCAAGTGATGATGAAGAGCCAGGTCCAGCCTTTCCAATGCAAGAATCTCAAGAGCCCAATTTGGAAAA
CATTTGGGGGCAAGAAGCTGCAGAGGTAGATCAAGAGCTCGTTGAACTACTAGTGAAAGAAACGGAAGCA
AGATTTCCAGATGTAGCAAATGGGTTTATTGAGGAAATAATTCATTTTAAGAATTATTATGATCTGAATG
TACTTTGTAATTTTCTTCTGGAAAACCCAGATTATCCAAAGAGAGAAGACAGAATCATTATAAATCCCAG
TAGCAGTCTGCTGGCCAGCCAAGATGAGACAAAGTTGCCTAAAATAGACTTTTTTGACTATTCTAAATTG
ACCCCTCTTGACCAGCGCTGCTTCATCCAAGCTGCTGACCTCCTCATGGCCGACTTCAAAGTGCTCAGTA
GTCAGGACATCAAGTGGGCCCTGCACGAGCTCAAAGGACACTATGCAATCACCCGAAAGGCCTTGTCTGA
TGCCATTAAAAAATGGCAGGAGCTGTCACCAGAAACCAGTGGAAAAAGGAAGAAGAGAAAACAAATGAAC
CAGTATTCTTACATTGATTTCAAGTTTGAACAAGGTGACATAAAAATAGAAAAGAGGATGTTCTTTCTTG
AAAATAAGCGACGACATTGTAGGTCCTATGACCGACGTGCTCTCCTTCCAGCTGTGCAACAAGAGCAGGA
GTTCTATGAGCAGAAAATCAAAGAGATGGCAGAGCATGAAGACTTTTTGCTTGCCCTACAGATGAATGAA
GAACAGTATCAAAAGGATGGCCAGCTGATTGAGTGTCGCTGCTGCTATGGGGAATTTCCATTCGAGGAGC
TGACGCAGTGCGCAGATGCTCACTTGTTCTGCAAAGAGTGTCTCATCAGATATGCCCAAGAGGCAGTCTT
TGGATCTGGAAAGTTGGAGCTCAGCTGCATGGAAGGCAGCTGCACGTGTTCGTTCCCAACCAGTGAGCTG
GAGAAGGTGCTCCCCCAGACCATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGGCAG
CCTACGCCGACGAGCTTGTCAGGTGCCCGTCCTGTAGCTTTCCGGCTCTGTTGGACAGTGATGTGAAGAG
GTTCAGCTGTCCTAATCCTCACTGCCGAAAGGAAACCTGTAGGAAGTGTCAGGGACTCTGGAAAGAACAT
AATGGCCTCACCTGTGAAGAGCTGGCTGAAAAAGACGACATCAAGTACCGTACCTCTATTGAAGAAAAAA
TGACTGCTGCCCGCATTAGAAAATGCCACAAGTGTGGGACTGGCCTCATCAAATCTGAAGGCTGCAACCG
CATGTCTTGCCGCTGTGGTGCCCAGATGTGCTACCTCTGTCGAGTTTCTATTAATGGATATGACCATTTC
TGCCAACATCCCCGCTCACCAGGAGCCCCTTGCCAGGAGTGTTCAAGATGCTCTCTCTGGACCGATCCCA
CTGAAGATGATGAGAAGCTTATTGAGGAAATCCAGAAGGAGGCTGAAGAGGAACAGAAAAGAAAGAATGG
AGAGAACACCTTCAAACGCATTGGACCCCCGCTGGAGAAGCCTGTGGAGAAGGTGCAGAGGGTGGAGGCC
CTCCCGAGGCCCGTTCCGCAGAACCTGCCACAGCCACAGATGCCACCCTATGCCTTCGCGCACCCACCCT
TCCCCCTGCCTCCCGTGCGGCCTGTGTTCAACAACTTCCCACTCAACATGGGGCCTATCCCAGCCCCGTA
CGTGCCCCCTCTGCCCAACGTGCGGGTCAACTATGACTTCGGTCCCATCCACATGCCCCTGGAGCACAAC
CTGCCCATGCACTTTGGCCCCCAGCCGCGGCATCGCTTCTGA

Translation (923 aa):
MEEGNNNEEVIHLNNFHCHRGQEWINLRDGPITISDSSDEERIPMLVTPAPQQHEEEDLDDDVILTETNK
PQRSRPNLIKPAAQWQDLKRLGEERPKKSRAAFESDKSSYFSVCNNPLFDSGAQDDSEDDYGEFLDLGPP
GISEFTKPSGQTEREPKPGPSHNQAANDIVNPRSEQKVIILEEGSLLYTESDPLETQNQSSEDSETELLS
NLGESAALADDQAIEEDCWLDHPYFQSLNQQPREITNQVVPQERQPEAELGRLLFQHEFPGPAFPRPEPQ
QGGISGPSSPQPAHPLGEFEDQQLASDDEEPGPAFPMQESQEPNLENIWGQEAAEVDQELVELLVKETEA
RFPDVANGFIEEIIHFKNYYDLNVLCNFLLENPDYPKREDRIIINPSSSLLASQDETKLPKIDFFDYSKL
TPLDQRCFIQAADLLMADFKVLSSQDIKWALHELKGHYAITRKALSDAIKKWQELSPETSGKRKKRKQMN
QYSYIDFKFEQGDIKIEKRMFFLENKRRHCRSYDRRALLPAVQQEQEFYEQKIKEMAEHEDFLLALQMNE
EQYQKDGQLIECRCCYGEFPFEELTQCADAHLFCKECLIRYAQEAVFGSGKLELSCMEGSCTCSFPTSEL
EKVLPQTILYKYYERKAEEEVAAAYADELVRCPSCSFPALLDSDVKRFSCPNPHCRKETCRKCQGLWKEH
NGLTCEELAEKDDIKYRTSIEEKMTAARIRKCHKCGTGLIKSEGCNRMSCRCGAQMCYLCRVSINGYDHF
CQHPRSPGAPCQECSRCSLWTDPTEDDEKLIEEIQKEAEEEQKRKNGENTFKRIGPPLEKPVEKVQRVEA
LPRPVPQNLPQPQMPPYAFAHPPFPLPPVRPVFNNFPLNMGPIPAPYVPPLPNVRVNYDFGPIHMPLEHN
LPMHFGPQPRHRF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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