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Report for CCDS54257.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54257.1 Public Homo sapiens 19 ZNF461 24 110 108 CCDS HistoryNCBI Gene:92283Re-query CCDS DB by CCDS ID:54257.1Re-query CCDS DB by GeneID:92283See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54257.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000588268.6 ENSP00000467931.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000588268.6Link to Ensembl Protein Viewer:ENSP00000467931.1Re-query CCDS DB by Nucleotide ID:ENST00000588268Re-query CCDS DB by Protein ID:ENSP00000467931
Original member Current member NCBI NM_153257.5 NP_694989.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153257.5Link to Protein Sequence:NP_694989.2Re-query CCDS DB by Nucleotide ID:NM_153257Re-query CCDS DB by Protein ID:NP_694989Link to BLAST:NP_694989.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694989.2 563 Q8TAF7-1 563 100% 0 0

Chromosomal Locations for CCDS 54257.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 36638653 36640043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36643794 36643862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36656448 36656543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36658299 36658425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36664698 36664706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1692 nt):
ATGGCCCATGAGTTGGTGATGTTCAGAGATGTGGCTATAGATGTCTCTCAGGAGGAATGGGAATGCCTGA
ACCCAGCGCAGAGGAATTTGTACAAGGAGGTGATGTTGGAGAATTATAGCAACTTGGTGTCACTTGGACT
TTCTGTTTCTAAGCCAGCCGTAATCTCCTCATTGGAGCAAGGGAAGGAGCCCTGGATGGTTGTGAGGGAA
GAGACAGGAAGATGGTGCCCAGGTACATGGAAAACTTGGGGATTTCACAATAATTTCTTGGACAATAATG
AGGCTACAGACATAAATGCAGACTTGGCATCCAGAGATGAGCCCCAGAAGTTATCTCCAAAAAGGGATAT
TTATGAAACAGAATTATCCCAGTGGGTTAACATGGAAGAATTTAAAAGCCATAGTCCTGAGAGATCAATT
TTCAGCGCTATCTGGGAAGGCAACTGTCATTTTGAGCAACATCAGGGACAAGAGGAGGGTTATTTTAGAC
AACTTATGATTAACCATGAAAACATGCCCATTTTTAGCCAACATACTTTACTCACTCAAGAATTTTATGA
TAGAGAGAAAATCTCTGAATGTAAAAAGTGTAGAAAAATCTTCAGTTACCATTTATTTTTTAGTCACCAC
AAAAGAACTCATTCTAAAGAACTTTCTGAATGTAAAGAATGCACAGAAATTGTTAATACACCATGCCTTT
TTAAACAACAGACAATTCAAAATGGTGACAAATGCAATGAGTGTAAAGAATGTTGGAAGGCCTTTGTTCA
TTGCTCACAACTTAAACATCTAAGAATTCATAATGGTGAAAAACGCTATGAATGTAACGAATGTGGGAAG
GCCTTTAATTATGGCTCAGAACTTACTCTACATCAAAGAATTCACACTGGTGAGAAACCTTATGAATGTA
AAGAATGTGGGAAGGCCTTTAGACAGCGATCACAGCTTACTCAACATCAGAGACTTCATACTGGTGAAAA
ACCCTATGAATGTAAGCAATGTGGGAAGGCTTTTATTCGTGGCTTTCAACTTACTGAACACCTGCGACTC
CATACTGGAGAGAAACCTTATGAATGTAAAGAATGTGGAAAGACTTTTAGGCATCGCTCACATCTTACTA
TACATCAGAGAATTCATACTGGTGAGAAACCCTATGAATGTCGGGAATGTGGGAAGGCCTTTAGCTATCA
CTCAAGCTTCTCACACCATCAGAAAATTCATTCTGGCAAGAAACCTTATGAATGTCATGAATGTGGGAAG
GCTTTTTGTGATGGCTTACAACTAACCCTACATCAGAGGATTCATACTGGTGAGAAACCCTATGAGTGTA
AGGAATGTGGGAAGACTTTTAGACAGTGTTCACACCTCAAAAGACATCAGAGAATTCATACTGGTGAGAA
ACCTCATGAATGCATGATATGTGGTAAGGCCTTTAGACTTCATTCACACCTTATTCAACATCAAAGAATT
CATACTGGTGAGAAACCCTATGAATGTAAGGAATGTGGGAAGGCCTTTAGCTATCATTCAAGCTTCTCAC
ACCATCAGAGAATTCATTCTGGAAAGAAACCTTATCAATGCGGGAAGGCGTTTAATCATAGATTACAACT
TAACTTACATCAGACTCTTCATACTGGCGAGAAGCCAGTCAGGTTTCCTCTCCTCCCTCCCCATCCTAGT
CTAGCATCATGA

Translation (563 aa):
MAHELVMFRDVAIDVSQEEWECLNPAQRNLYKEVMLENYSNLVSLGLSVSKPAVISSLEQGKEPWMVVRE
ETGRWCPGTWKTWGFHNNFLDNNEATDINADLASRDEPQKLSPKRDIYETELSQWVNMEEFKSHSPERSI
FSAIWEGNCHFEQHQGQEEGYFRQLMINHENMPIFSQHTLLTQEFYDREKISECKKCRKIFSYHLFFSHH
KRTHSKELSECKECTEIVNTPCLFKQQTIQNGDKCNECKECWKAFVHCSQLKHLRIHNGEKRYECNECGK
AFNYGSELTLHQRIHTGEKPYECKECGKAFRQRSQLTQHQRLHTGEKPYECKQCGKAFIRGFQLTEHLRL
HTGEKPYECKECGKTFRHRSHLTIHQRIHTGEKPYECRECGKAFSYHSSFSHHQKIHSGKKPYECHECGK
AFCDGLQLTLHQRIHTGEKPYECKECGKTFRQCSHLKRHQRIHTGEKPHECMICGKAFRLHSHLIQHQRI
HTGEKPYECKECGKAFSYHSSFSHHQRIHSGKKPYQCGKAFNHRLQLNLHQTLHTGEKPVRFPLLPPHPS
LAS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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