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Report for CCDS14395.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14395.1 Public Homo sapiens X OTUD6A 24 110 108 CCDS HistoryNCBI Gene:139562Re-query CCDS DB by CCDS ID:14395.1Re-query CCDS DB by GeneID:139562See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14395.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338352.3 ENSP00000339389.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000338352.3Link to Ensembl Protein Viewer:ENSP00000339389.2Re-query CCDS DB by Nucleotide ID:ENST00000338352Re-query CCDS DB by Protein ID:ENSP00000339389
Original member Current member NCBI NM_207320.3 NP_997203.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207320.3Link to Protein Sequence:NP_997203.1Re-query CCDS DB by Nucleotide ID:NM_207320Re-query CCDS DB by Protein ID:NP_997203Link to BLAST:NP_997203.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997203.1 288 Q7L8S5 288 100% 0 0

Chromosomal Locations for CCDS 14395.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 70062525 70063391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (867 nt):
ATGGATGATCCGAAGAGTGAACAGCAGCGCATACTGCGCCGCCACCAACGCGAGAGGCAGGAGCTGCAGG
CCCAGATCCGGAGCTTAAAAAACTCGGTCCCCAAGACCGACAAGACGAAAAGAAAGCAGTTGCTCCAAGA
CGTGGCCCGCATGGAGGCCGAGATGGCTCAGAAGCACCGGCAGGAGCTGGAGAAGTTCCAAGACGACAGT
AGCATTGAATCTGTCGTCGAAGACCTGGCCAAGATGAATCTGGAAAACCGGCCTCCCCGCTCCTCCAAAG
CCCACAGAAAGAGAGAAAGAATGGAGTCCGAGGAGAGGGAGCGCCAGGAGAGCATCTTCCAGGCTGAGAT
GTCGGAGCACCTGGCCGGCTTCAAGCGCGAGGAGGAGGAGAAGCTCGCCGCCATCCTGGGAGCCAGGGGT
CTGGAGATGAAAGCGATCCCGGCCGACGGCCACTGCATGTACCGCGCCATCCAAGACCAGCTGGTGTTCA
GCGTGTCTGTGGAGATGCTGCGCTGCCGCACCGCCAGCTACATGAAGAAGCACGTCGACGAGTTCCTGCC
CTTCTTCAGCAACCCCGAGACCAGCGACTCCTTCGGCTACGACGACTTCATGATCTACTGCGACAACATC
GTGCGCACCACGGCATGGGGAGGCCAGCTGGAGCTGAGGGCCCTGTCGCACGTCCTGAAGACCCCCATCG
AGGTGATCCAGGCCGACTCGCCCACCTTGATCATCGGGGAGGAGTACGTCAAGAAGCCGATCATCCTGGT
CTACCTGCGCTATGCCTACAGCCTCGGCGAGCACTACAACTCCGTGACACCGCTCGAGGCCGGCGCCGCC
GGGGGCGTGCTCCCGCGTCTCCTGTAG

Translation (288 aa):
MDDPKSEQQRILRRHQRERQELQAQIRSLKNSVPKTDKTKRKQLLQDVARMEAEMAQKHRQELEKFQDDS
SIESVVEDLAKMNLENRPPRSSKAHRKRERMESEERERQESIFQAEMSEHLAGFKREEEEKLAAILGARG
LEMKAIPADGHCMYRAIQDQLVFSVSVEMLRCRTASYMKKHVDEFLPFFSNPETSDSFGYDDFMIYCDNI
VRTTAWGGQLELRALSHVLKTPIEVIQADSPTLIIGEEYVKKPIILVYLRYAYSLGEHYNSVTPLEAGAA
GGVLPRLL


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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