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Report for CCDS209.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
209.1 Public Homo sapiens 1 FAM43B 24 110 108 CCDS HistoryNCBI Gene:163933Re-query CCDS DB by CCDS ID:209.1Re-query CCDS DB by GeneID:163933See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 209.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332947.6 ENSP00000331397.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000332947.6Link to Ensembl Protein Viewer:ENSP00000331397.4Re-query CCDS DB by Nucleotide ID:ENST00000332947Re-query CCDS DB by Protein ID:ENSP00000331397
Original member Current member NCBI NM_207334.3 NP_997217.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207334.3Link to Protein Sequence:NP_997217.1Re-query CCDS DB by Nucleotide ID:NM_207334Re-query CCDS DB by Protein ID:NP_997217Link to BLAST:NP_997217.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997217.1 329 Q6ZT52 329 100% 0 0

Chromosomal Locations for CCDS 209.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 20552974 20553963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (990 nt):
ATGCTGCCCTGGAGACGTAACAAATTCGTGCTGGTGGAGGACGAGGCCAAGTGCAAGGCGAAGAGCCTGA
GTCCGGGGCTCGCCTACACGTCGCTGCTCTCCAGCTTCCTGCGCTCCTGCCCGGACCTGCTGCCCGACTG
GCCGCTGGAGCGCTTGGGCCGTGTGTTCCGCAGCCGGCGCCAGAAAGTGGAGCTCAACAAGGAGGACCCG
ACCTACACCGTGTGGTACCTGGGCAACGCCGTCACCCTGCACGCCAAGGGCGACGGCTGCACCGACGACG
CCGTGGGCAAGATCTGGGCTCGCTGCGGGCCTGGCGGGGGCACTAAGATGAAGCTGACGCTGGGGCCGCA
CGGCATCCGCATGCAGCCGTGCGAGCGCAGCGCCGCCGGGGGTTCGGGGGGCCGCAGGCCGGCGCACGCC
TACCTGCTGCCGCGCATCACCTACTGCACGGCGGACGGGCGCCACCCGCGCGTCTTCGCCTGGGTCTACC
GCCACCAGGCGCGCCACAAGGCCGTGGTGCTGCGCTGCCACGCTGTGCTGCTGGCGCGGGCGCACAAGGC
GCGCGCCCTGGCCCGCCTGCTCCGCCAGACCGCGCTGGCGGCCTTCAGCGACTTCAAGCGCCTGCAGCGC
CAGAGCGACGCGCGCCACGTGCGCCAGCAGCATCTCCGCGCTGGGGGCGCCGCCGCCTCGGTGCCCCGCG
CCCCACTGCGCCGCCTGCTCAATGCCAAGTGCGCCTACCGGCCGCCGCCGAGCGAGCGCAGCCGCGGGGC
GCCGCGCCTCAGCAGCATCCAGGAGGAGGACGAGGAGGAGGAGGAGGACGACGCGGAGGAGCAAGAGGGA
GGAGTCCCCCAGCGCGAGCGGCCGGAGGTGCTCAGCCTGGCCCGGGAGCTGAGGACGTGCAGCCTGCGGG
GCGCCCCGGCGCCCCCGCCGCCCGCGCAGCCCCGCCGCTGGAAGGCCGGCCCCAGGGAGCGGGCGGGCCA
GGCGCGCTGA

Translation (329 aa):
MLPWRRNKFVLVEDEAKCKAKSLSPGLAYTSLLSSFLRSCPDLLPDWPLERLGRVFRSRRQKVELNKEDP
TYTVWYLGNAVTLHAKGDGCTDDAVGKIWARCGPGGGTKMKLTLGPHGIRMQPCERSAAGGSGGRRPAHA
YLLPRITYCTADGRHPRVFAWVYRHQARHKAVVLRCHAVLLARAHKARALARLLRQTALAAFSDFKRLQR
QSDARHVRQQHLRAGGAAASVPRAPLRRLLNAKCAYRPPPSERSRGAPRLSSIQEEDEEEEEDDAEEQEG
GVPQRERPEVLSLARELRTCSLRGAPAPPPPAQPRRWKAGPRERAGQAR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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