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Report for CCDS27355.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27355.1 Public Mus musculus 14 Fgf14 23 108 98 CCDS HistoryNCBI Gene:14169Re-query CCDS DB by CCDS ID:27355.1Re-query CCDS DB by GeneID:14169See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27355.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000095529.9 ENSMUSP00000093185.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000095529.9Link to Ensembl Protein Viewer:ENSMUSP00000093185.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000095529Re-query CCDS DB by Protein ID:ENSMUSP00000093185
Original member NCBI NM_207667.3 NP_997550.1 Updated not alive Link to Nucleotide Sequence:NM_207667.3Link to Protein Sequence:NP_997550.1Re-query CCDS DB by Nucleotide ID:NM_207667Re-query CCDS DB by Protein ID:NP_997550
Current member NCBI NM_207667.4 NP_997550.1 Accepted alive Link to Nucleotide Sequence:NM_207667.4Link to Protein Sequence:NP_997550.1Re-query CCDS DB by Nucleotide ID:NM_207667Re-query CCDS DB by Protein ID:NP_997550Link to BLAST:NP_997550.1

Chromosomal Locations for CCDS 27355.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 123980346 123980482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 123983769 123983967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 124132463 124132566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 124136182 124136292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 124676510 124676717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (759 nt):
ATGGTAAAACCGGTGCCCCTCTTCAGGAGAACTGATTTCAAGTTATTATTATGCAACCACAAGGGCCTCT
TCTTTCTCAGGGTGTCTAAGCTGCTGGGTTGCTTTTCGCCCAAATCAATGTGGTTTCTTTGGAACATTTT
CAGCAAAGGAACGCATATGCTGCAGTGTCTTTGTGGCAAGAGTCTTAAGAAAAACAAGAACCCAACTGAT
CCCCAGCTCAAGGGCATAGTGACCAGGTTATATTGCAGGCAAGGCTACTACTTGCAGATGCACCCCGATG
GAGCTCTCGATGGAACCAAGGATGACAGCACCAATTCCACACTGTTCAACCTCATCCCAGTGGGACTGCG
CGTTGTTGCCATCCAGGGAGTGAAGACAGGGTTGTACATAGCAATGAATGGAGAAGGTTACCTCTACCCA
TCAGAACTTTTTACCCCTGAATGCAAGTTTAAAGAGTCTGTTTTTGAAAACTATTATGTAATCTACTCAT
CCATGCTGTACAGGCAACAGGAGTCTGGCAGAGCCTGGTTTTTGGGATTAAATAAGGAAGGGCAAGTTAT
GAAAGGAAACAGAGTAAAGAAAACCAAACCAGCAGCTCATTTTCTACCCAAGCCATTGGAAGTTGCCATG
TACCGAGAACCATCCTTGCATGATGTTGGTGAAACAGTCCCGAAAGCTGGGGTGACGCCAAGCAAAAGTA
CAAGTGCATCTGCAATAATGAATGGAGGCAAACCAGTCAACAAGTGCAAGACCACATAG

Translation (252 aa):
MVKPVPLFRRTDFKLLLCNHKGLFFLRVSKLLGCFSPKSMWFLWNIFSKGTHMLQCLCGKSLKKNKNPTD
PQLKGIVTRLYCRQGYYLQMHPDGALDGTKDDSTNSTLFNLIPVGLRVVAIQGVKTGLYIAMNGEGYLYP
SELFTPECKFKESVFENYYVIYSSMLYRQQESGRAWFLGLNKEGQVMKGNRVKKTKPAAHFLPKPLEVAM
YREPSLHDVGETVPKAGVTPSKSTSASAIMNGGKPVNKCKTT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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