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Report for CCDS5644.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5644.1 Public Homo sapiens 7 DYNC1I1 24 110 108 CCDS HistoryNCBI Gene:1780Re-query CCDS DB by CCDS ID:5644.1Re-query CCDS DB by GeneID:1780See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5644.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324972.10 ENSP00000320130.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000324972.10Link to Ensembl Protein Viewer:ENSP00000320130.6Re-query CCDS DB by Nucleotide ID:ENST00000324972Re-query CCDS DB by Protein ID:ENSP00000320130
Original member Current member NCBI NM_004411.5 NP_004402.1 Accepted alive Link to Nucleotide Sequence:NM_004411.5Link to Protein Sequence:NP_004402.1Re-query CCDS DB by Nucleotide ID:NM_004411Re-query CCDS DB by Protein ID:NP_004402Link to BLAST:NP_004402.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004402.1 645 O14576-1 645 100% 0 0

Chromosomal Locations for CCDS 5644.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 95804730 95804837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 95810392 95810506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 95813196 95813337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 95828057 95828116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 95869883 95869998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 95977512 95977601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 95984815 95984977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 95987056 95987155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 95995948 95996073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 96028175 96028321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 96032667 96032780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 96035619 96035752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 96039277 96039421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 96076057 96076197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 96080363 96080488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 96097483 96097593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1938 nt):
ATGTCTGACAAAAGTGACTTAAAAGCTGAGCTAGAGCGCAAAAAGCAGCGCTTAGCACAGATAAGAGAAG
AGAAGAAACGGAAGGAAGAGGAGAGGAAAAAGAAAGAGGCTGATATGCAGCAGAAGAAAGAACCCGTTCA
GGACGACTCTGATCTGGATCGCAAACGACGAGAGACAGAGGCTTTGCTGCAAAGCATTGGTATCTCACCG
GAGCCGCCTCTAGTGCAGCCGCTGCATTTTTTAACATGGGATACCTGTTATTTTCATTATTTAGTCCCAA
CCCCTATGTCTCCCTCCTCGAAATCAGTGAGCACTCCCAGTGAAGCTGGAAGCCAAGACTCAGGCGATCT
GGGGCCATTAACAAGGACCCTGCAGTGGGACACAGACCCCTCAGTGCTCCAGCTGCAGTCAGACTCAGAA
CTTGGAAGAAGACTGCATAAACTGGGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAG
TGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAGTCTGAAGAGGATGAGGAAGATGAGGA
AATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTGAAGGAA
GCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTT
TTGACCGGACAATACGGGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGG
CCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAGGCTGGAGCCAATCTTTCTTTCAATCGTCAGTTCTAT
GATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAGTACCCTGAGCTGATGG
TGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAA
GTTTAAGAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGT
TTCCATCCTAACTTGGTGGTTGGTGGGACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATC
GAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACACACGCATCCCGTGTACTGTGTAAATGT
TGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGGAGCCTG
GACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCG
GAATGGCTTTCCCAACGGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGC
TTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAGGTCTTTGAAGGTCACCAAGGGCCAGTGACAGGAATT
AACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCATCATTTGACTGGACTG
TCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGA
TGTCATGTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGG
AACCTCAACAATGACACCGAGGTTCCAACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTG
TTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCGGAAGGCCGTATTTGGGTCTATGACGT
TGGAGAGCTTGCAGTTCCCCACAATGATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAATTCGTGCT
AACAGAGCTGATAGCGAGGAGGAAGGCACTGTTGAGTTATCTGCCTAG

Translation (645 aa):
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRRETEALLQSIGISP
EPPLVQPLHFLTWDTCYFHYLVPTPMSPSSKSVSTPSEAGSQDSGDLGPLTRTLQWDTDPSVLQLQSDSE
LGRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVESKVGQDSELENQDKKQEVKE
APPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFNRQFY
DEHWSKHRVVTCMDWSLQYPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFAR
FHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSL
DMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGEVFEGHQGPVTGI
NCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLW
NLNNDTEVPTASVAIEGASALNRVRWAQAGKEVAVGDSEGRIWVYDVGELAVPHNDEWTRFARTLVEIRA
NRADSEEEGTVELSA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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