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Report for CCDS8096.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8096.1 Public Homo sapiens 11 MRPL49 24 110 108 CCDS HistoryNCBI Gene:740Re-query CCDS DB by CCDS ID:8096.1Re-query CCDS DB by GeneID:740See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8096.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000279242.7 ENSP00000279242.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000279242.7Link to Ensembl Protein Viewer:ENSP00000279242.2Re-query CCDS DB by Nucleotide ID:ENST00000279242Re-query CCDS DB by Protein ID:ENSP00000279242
Original member Current member EBI ENST00000526319.5 ENSP00000434190.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000526319.5Link to Ensembl Protein Viewer:ENSP00000434190.1Re-query CCDS DB by Nucleotide ID:ENST00000526319Re-query CCDS DB by Protein ID:ENSP00000434190
Original member Current member NCBI NM_004927.4 NP_004918.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004927.4Link to Protein Sequence:NP_004918.1Re-query CCDS DB by Nucleotide ID:NM_004927Re-query CCDS DB by Protein ID:NP_004918Link to BLAST:NP_004918.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004918.1 166 Q13405 166 100% 0 0

Chromosomal Locations for CCDS 8096.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 65122347 65122424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65124502 65124652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65125488 65125612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65125726 65125872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (501 nt):
ATGGCAGCTACCATGTTCCGGGCTACGCTGCGGGGATGGAGAACCGGTGTCCAGCGGGGCTGCGGGCTAC
GGCTGTTGAGCCAGACCCAGGGCCCTCCAGATTACCCCAGGTTTGTGGAGTCTGTGGATGAATATCAGTT
TGTGGAGCGCCTGTTACCGGCTACCAGGATCCCAGATCCCCCAAAGCATGAACATTATCCTACCCCTAGT
GGCTGGCAGCCTCCCAGAGACCCCCCACCCAACCTGCCTTACTTTGTACGACGCTCTCGGATGCACAACA
TCCCCGTCTACAAGGACATCACGCATGGCAACCGGCAGATGACTGTGATCCGGAAAGTGGAAGGGGACAT
CTGGGCCCTGCAGAAAGACGTGGAAGATTTTCTGAGCCCGCTGCTGGGGAAGACACCTGTCACCCAGGTC
AATGAGGTGACAGGTACCCTACGGATCAAGGGCTACTTTGACCAGGAGCTTAAAGCCTGGCTCTTGGAGA
AAGGCTTCTGA

Translation (166 aa):
MAATMFRATLRGWRTGVQRGCGLRLLSQTQGPPDYPRFVESVDEYQFVERLLPATRIPDPPKHEHYPTPS
GWQPPRDPPPNLPYFVRRSRMHNIPVYKDITHGNRQMTVIRKVEGDIWALQKDVEDFLSPLLGKTPVTQV
NEVTGTLRIKGYFDQELKAWLLEKGF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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