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Report for CCDS10821.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10821.1 Public Homo sapiens 16 CA7 24 110 108 CCDS HistoryNCBI Gene:766Re-query CCDS DB by CCDS ID:10821.1Re-query CCDS DB by GeneID:766See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10821.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338437.7 ENSP00000345659.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000338437.7Link to Ensembl Protein Viewer:ENSP00000345659.2Re-query CCDS DB by Nucleotide ID:ENST00000338437Re-query CCDS DB by Protein ID:ENSP00000345659
Original member Current member NCBI NM_005182.3 NP_005173.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005182.3Link to Protein Sequence:NP_005173.1Re-query CCDS DB by Nucleotide ID:NM_005182Re-query CCDS DB by Protein ID:NP_005173Link to BLAST:NP_005173.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005173.1 264 P43166-1 264 100% 0 0

Chromosomal Locations for CCDS 10821.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 66844488 66844527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66847030 66847227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66850541 66850659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66851463 66851558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66851664 66851726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66852712 66852867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66853376 66853498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (795 nt):
ATGACCGGCCACCACGGCTGGGGCTACGGCCAGGACGACGGCCCCTCGCATTGGCACAAGCTGTATCCCA
TTGCCCAGGGAGATCGCCAATCACCCATCAATATCATCTCCAGCCAGGCTGTGTACTCTCCCAGCCTGCA
ACCACTGGAGCTTTCCTATGAGGCCTGCATGTCCCTCAGCATCACCAACAATGGCCACTCTGTCCAGGTA
GACTTCAATGACAGCGATGACCGAACCGTGGTGACTGGGGGCCCCCTGGAAGGGCCCTACCGCCTCAAGC
AGTTTCACTTCCACTGGGGCAAGAAGCACGATGTGGGTTCTGAGCACACGGTGGACGGCAAGTCCTTCCC
CAGCGAGCTGCATCTGGTTCACTGGAATGCCAAGAAGTACAGCACTTTTGGGGAGGCGGCCTCAGCACCT
GATGGCCTGGCTGTGGTTGGTGTTTTTTTGGAGACAGGAGACGAGCACCCCAGCATGAATCGTCTGACAG
ATGCGCTCTACATGGTCCGGTTCAAGGGCACCAAAGCCCAGTTCAGCTGCTTCAACCCCAAGTGCCTCCT
GCCTGCCAGCCGGCACTACTGGACCTACCCGGGCTCTCTGACGACTCCCCCACTCAGTGAGAGTGTCACC
TGGATTGTGCTCCGGGAGCCCATCTGCATCTCTGAAAGGCAGATGGGGAAGTTCCGGAGCCTGCTTTTTA
CCTCGGAGGACGATGAGAGGATCCACATGGTGAACAACTTCCGGCCACCACAGCCACTGAAGGGCCGCGT
GGTAAAGGCCTCCTTCCGGGCCTGA

Translation (264 aa):
MTGHHGWGYGQDDGPSHWHKLYPIAQGDRQSPINIISSQAVYSPSLQPLELSYEACMSLSITNNGHSVQV
DFNDSDDRTVVTGGPLEGPYRLKQFHFHWGKKHDVGSEHTVDGKSFPSELHLVHWNAKKYSTFGEAASAP
DGLAVVGVFLETGDEHPSMNRLTDALYMVRFKGTKAQFSCFNPKCLLPASRHYWTYPGSLTTPPLSESVT
WIVLREPICISERQMGKFRSLLFTSEDDERIHMVNNFRPPQPLKGRVVKASFRA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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