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Report for CCDS3804.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3804.1 Public Homo sapiens 4 NPY5R 24 110 108 CCDS HistoryNCBI Gene:4889Re-query CCDS DB by CCDS ID:3804.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3804.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338566.8 ENSP00000339377.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000338566.8Link to Ensembl Protein Viewer:ENSP00000339377.3Re-query CCDS DB by Nucleotide ID:ENST00000338566Re-query CCDS DB by Protein ID:ENSP00000339377
Original member Current member EBI ENST00000506953.1 ENSP00000423474.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000506953.1Link to Ensembl Protein Viewer:ENSP00000423474.1Re-query CCDS DB by Nucleotide ID:ENST00000506953Re-query CCDS DB by Protein ID:ENSP00000423474
Original member Current member EBI ENST00000515560.1 ENSP00000423917.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000515560.1Link to Ensembl Protein Viewer:ENSP00000423917.1Re-query CCDS DB by Nucleotide ID:ENST00000515560Re-query CCDS DB by Protein ID:ENSP00000423917
Original member Current member NCBI NM_001317091.2 NP_001304020.1 Accepted alive Link to Nucleotide Sequence:NM_001317091.2Link to Protein Sequence:NP_001304020.1Re-query CCDS DB by Nucleotide ID:NM_001317091Re-query CCDS DB by Protein ID:NP_001304020Link to BLAST:NP_001304020.1
Original member Current member NCBI NM_001317092.2 NP_001304021.1 Accepted alive Link to Nucleotide Sequence:NM_001317092.2Link to Protein Sequence:NP_001304021.1Re-query CCDS DB by Nucleotide ID:NM_001317092Re-query CCDS DB by Protein ID:NP_001304021Link to BLAST:NP_001304021.1
Original member Current member NCBI NM_006174.4 NP_006165.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006174.4Link to Protein Sequence:NP_006165.1Re-query CCDS DB by Nucleotide ID:NM_006174Re-query CCDS DB by Protein ID:NP_006165Link to BLAST:NP_006165.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001304020.1 445 Q15761 445 100% 0 0
NP_001304021.1 445 Q15761 445 100% 0 0
NP_006165.1 445 Q15761 445 100% 0 0

Chromosomal Locations for CCDS 3804.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 163350274 163351611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1338 nt):
ATGGATTTAGAGCTCGACGAGTATTATAACAAGACACTTGCCACAGAGAATAATACTGCTGCCACTCGGA
ATTCTGATTTCCCAGTCTGGGATGACTATAAAAGCAGTGTAGATGACTTACAGTATTTTCTGATTGGGCT
CTATACATTTGTAAGTCTTCTTGGCTTTATGGGGAATCTACTTATTTTAATGGCTCTCATGAAAAAGCGT
AATCAGAAGACTACGGTAAACTTCCTCATAGGCAATCTGGCCTTTTCTGATATCTTGGTTGTGCTGTTTT
GCTCACCTTTCACACTGACGTCTGTCTTGCTGGATCAGTGGATGTTTGGCAAAGTCATGTGCCATATTAT
GCCTTTTCTTCAATGTGTGTCAGTTTTGGTTTCAACTTTAATTTTAATATCAATTGCCATTGTCAGGTAT
CATATGATAAAACATCCCATATCTAATAATTTAACAGCAAACCATGGCTACTTTCTGATAGCTACTGTCT
GGACACTAGGTTTTGCCATCTGTTCTCCCCTTCCAGTGTTTCACAGTCTTGTGGAACTTCAAGAAACATT
TGGTTCAGCATTGCTGAGCAGCAGGTATTTATGTGTTGAGTCATGGCCATCTGATTCATACAGAATTGCC
TTTACTATCTCTTTATTGCTAGTTCAGTATATTCTGCCCTTAGTTTGTCTTACTGTAAGTCATACAAGTG
TCTGCAGAAGTATAAGCTGTGGATTGTCCAACAAAGAAAACAGACTTGAAGAAAATGAGATGATCAACTT
AACTCTTCATCCATCCAAAAAGAGTGGGCCTCAGGTGAAACTCTCTGGCAGCCATAAATGGAGTTATTCA
TTCATCAAAAAACACAGAAGAAGATATAGCAAGAAGACAGCATGTGTGTTACCTGCTCCAGAAAGACCTT
CTCAAGAGAACCACTCCAGAATACTTCCAGAAAACTTTGGCTCTGTAAGAAGTCAGCTCTCTTCATCCAG
TAAGTTCATACCAGGGGTCCCCACTTGCTTTGAGATAAAACCTGAAGAAAATTCAGATGTTCATGAATTG
AGAGTAAAACGTTCTGTTACAAGAATAAAAAAGAGATCTCGAAGTGTTTTCTACAGACTGACCATACTGA
TATTAGTATTTGCTGTTAGTTGGATGCCACTACACCTTTTCCATGTGGTAACTGATTTTAATGACAATCT
TATTTCAAATAGGCATTTCAAGTTGGTGTATTGCATTTGTCATTTGTTGGGCATGATGTCCTGTTGTCTT
AATCCAATTCTATATGGGTTTCTTAATAATGGGATTAAAGCTGATTTAGTGTCCCTTATACACTGTCTTC
ATATGTAA

Translation (445 aa):
MDLELDEYYNKTLATENNTAATRNSDFPVWDDYKSSVDDLQYFLIGLYTFVSLLGFMGNLLILMALMKKR
NQKTTVNFLIGNLAFSDILVVLFCSPFTLTSVLLDQWMFGKVMCHIMPFLQCVSVLVSTLILISIAIVRY
HMIKHPISNNLTANHGYFLIATVWTLGFAICSPLPVFHSLVELQETFGSALLSSRYLCVESWPSDSYRIA
FTISLLLVQYILPLVCLTVSHTSVCRSISCGLSNKENRLEENEMINLTLHPSKKSGPQVKLSGSHKWSYS
FIKKHRRRYSKKTACVLPAPERPSQENHSRILPENFGSVRSQLSSSSKFIPGVPTCFEIKPEENSDVHEL
RVKRSVTRIKKRSRSVFYRLTILILVFAVSWMPLHLFHVVTDFNDNLISNRHFKLVYCICHLLGMMSCCL
NPILYGFLNNGIKADLVSLIHCLHM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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