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Report for CCDS34134.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34134.1 Public Homo sapiens 5 MED10 24 110 108 CCDS HistoryNCBI Gene:84246Re-query CCDS DB by CCDS ID:34134.1Re-query CCDS DB by GeneID:84246See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34134.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000255764.4 ENSP00000255764.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000255764.4Link to Ensembl Protein Viewer:ENSP00000255764.3Re-query CCDS DB by Nucleotide ID:ENST00000255764Re-query CCDS DB by Protein ID:ENSP00000255764
Original member Current member NCBI NM_032286.3 NP_115662.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032286.3Link to Protein Sequence:NP_115662.2Re-query CCDS DB by Nucleotide ID:NM_032286Re-query CCDS DB by Protein ID:NP_115662Link to BLAST:NP_115662.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115662.2 135 Q9BTT4 135 100% 0 0

Chromosomal Locations for CCDS 34134.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 6372503 6372601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 6374324 6374426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 6377166 6377249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 6378362 6378483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (408 nt):
ATGGCGGAGAAGTTTGACCACCTAGAGGAGCACCTGGAGAAGTTCGTGGAGAACATTCGGCAGCTCGGCA
TCATCGTCAGTGACTTCCAGCCCAGCAGCCAGGCCGGGCTCAACCAAAAGCTGAATTTTATTGTTACTGG
CTTACAGGATATTGACAAGTGCAGACAGCAGCTTCATGATATTACTGTACCGTTAGAAGTTTTTGAATAT
ATAGATCAAGGTCGAAATCCCCAGCTCTACACCAAAGAGTGCCTGGAGAGGGCTCTAGCTAAAAATGAGC
AAGTTAAAGGCAAGATCGACACCATGAAGAAATTTAAAAGCCTGTTGATTCAAGAACTTTCTAAAGTATT
TCCGGAAGACATGGCTAAGTATCGAAGCATCCGGGGGGAGGATCACCCGCCTTCTTAA

Translation (135 aa):
MAEKFDHLEEHLEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEY
IDQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLIQELSKVFPEDMAKYRSIRGEDHPPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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