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Report for CCDS33196.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33196.1 Public Homo sapiens 2 CHAC2 24 110 108 CCDS HistoryNCBI Gene:494143Re-query CCDS DB by CCDS ID:33196.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33196.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295304.5 ENSP00000295304.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000295304.5Link to Ensembl Protein Viewer:ENSP00000295304.4Re-query CCDS DB by Nucleotide ID:ENST00000295304Re-query CCDS DB by Protein ID:ENSP00000295304
Original member Current member NCBI NM_001008708.4 NP_001008708.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001008708.4Link to Protein Sequence:NP_001008708.1Re-query CCDS DB by Nucleotide ID:NM_001008708Re-query CCDS DB by Protein ID:NP_001008708Link to BLAST:NP_001008708.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001008708.1 184 Q8WUX2 184 100% 0 0

Chromosomal Locations for CCDS 33196.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 53767887 53768021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 53771907 53771942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 53774142 53774525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (555 nt):
ATGTGGGTTTTTGGTTACGGGTCCCTGATCTGGAAGGTGGATTTCCCCTATCAGGACAAGCTGGTCGGAT
ACATCACCAACTACAGCAGGCGCTTCTGGCAGGGCAGCACGGACCACCGCGGGGTCCCCGGCAAGCCTGG
AAGAGTTGTGACTCTTGTTGAAGATCCTGCGGGATGTGTATGGGGTGTTGCTTACAGATTGCCAGTAGGA
AAGGAAGAAGAAGTAAAAGCATACCTTGACTTCAGAGAAAAAGGAGGCTACAGAACCACAACAGTCATTT
TTTATCCAAAAGATCCCACAACAAAACCATTCAGTGTATTGCTATATATTGGAACATGTGATAATCCTGA
TTATCTTGGTCCTGCACCTCTGGAAGACATTGCTGAACAAATTTTTAATGCAGCTGGTCCAAGTGGAAGA
AATACAGAATATCTTTTTGAACTTGCAAATTCTATTAGGAACCTTGTGCCAGAAGAAGCAGATGAGCATC
TTTTCGCTTTGGAAAAATTAGTAAAGGAACGTTTAGAAGGGAAACAGAACCTCAATTGCATATAA

Translation (184 aa):
MWVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVWGVAYRLPVG
KEEEVKAYLDFREKGGYRTTTVIFYPKDPTTKPFSVLLYIGTCDNPDYLGPAPLEDIAEQIFNAAGPSGR
NTEYLFELANSIRNLVPEEADEHLFALEKLVKERLEGKQNLNCI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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